ArticleProceedings of the National Academy of Sciences of the United States of America2021
Multisubstrate DNA stable isotope probing reveals guild structure of bacteria that mediate soil carbon cycling.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 71 citations in OpenAlex.
- Hypoxia increases microbial carbon assimilation of taurine in a seasonally anoxic fjord.The ISME journal · 2026Article
- Conservation agriculture buffers persistent carbon loss under warming by microbial adaptation.The ISME journal · 2026Article
- Soil amelioration impacts viral ecology in saline-alkali lands.The ISME journal · 2026Article
- A genomic view of Earth's biomes.Nature reviews. Genetics · 2026Review
- Long term tillage regime alters bacterial assimilation of xylose and cellulose.Applied and environmental microbiology · 2025Article
- Overcoming toxicity: How nonantagonistic microbes manage to thrive in boom-and-bust environments.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Decoding Microbial Plastic Colonisation: Multi-Omic Insights Into the Fast-Evolving Dynamics of Early-Stage Biofilms.Proteomics · 2025Article
- Dynamics of bacterial growth, and life-history tradeoffs, explain differences in soil carbon cycling due to land-use.ISME communications · 2025Article
- Principal role of fungi in soil carbon stabilization during early pedogenesis in the high Arctic.Proceedings of the National Academy of Sciences of the United States of America · 2024Article
- Disproportionate Carbon Dioxide Efflux in Bacterial Metabolic Pathways for Different Organic Substrates Leads to Variable Contribution to Carbon-Use Efficiency.Environmental science & technology · 2024Article
- Genome-resolved metagenomics identifies novel active microbes in biogeochemical cycling within methanol-enriched soil.Environmental microbiology reports · 2024Article
- Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model.Nature microbiology · 2024Article
- Nutrient status changes bacterial interactions in a synthetic community.Applied and environmental microbiology · 2024Article
- MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment.GigaScience · 2024Article
- Advances and perspectives of using stable isotope probing (SIP)-based technologies in contaminant biodegradation.Water research X · 2023Article
- Article
- Elevated temperature and CONature communications · 2023Article
- HT-SIP: a semi-automated stable isotope probing pipeline identifies cross-kingdom interactions in the hyphosphere of arbuscular mycorrhizal fungi.Microbiome · 2022Article
- Tracing Carbon Metabolism with Stable Isotope Metabolomics Reveals the Legacy of Diverse Carbon Sources in Soil.Applied and environmental microbiology · 2022Article
- Unexpected high carbon losses in a continental glacier foreland on the Tibetan Plateau.ISME communications · 2022Article
Corrections and comments
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Authors and funding
4 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Soil microorganisms determine the fate of soil organic matter (SOM), and their activities compose a major component of the global carbon (C) cycle. We employed a multisubstrate, DNA-stable isotope probing experiment to track bacterial assimilation of C derived from distinct sources that varied in bioavailability. This approach allowed us to measure microbial contributions to SOM processing by measuring the C assimilation dynamics of diverse microorganisms as they interacted within soil. We identified and tracked 1,286 bacterial taxa that assimilated
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.