Evidence map›Paper›PMID 34796164›Full record

ArticleFrontiers in chemistry2021

Effective Search of Triterpenes with Anti-HSV-1 Activity Using a Classification Model by Logistic Regression.

Keiko Ogawa, Seikou Nakamura, Haruka Oguri, Kaori Ryu, Taichi Yoneda, Rumiko Hosoki

Abstract read
In one paragraph

Article in Frontiers in chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Keiko OgawaLaboratory of Regulatory Science, College of Pharmaceutical Sciences, Ritsumeikan University, Kusatsu, Japan.
Seikou NakamuraDepartment of Pharmacognosy, Kyoto Pharmaceutical University, Kyoto, Japan.
Haruka OguriLaboratory of Regulatory Science, College of Pharmaceutical Sciences, Ritsumeikan University, Kusatsu, Japan.
Kaori RyuDepartment of Pharmacognosy, Kyoto Pharmaceutical University, Kyoto, Japan.
Taichi YonedaDepartment of Pharmacognosy, Kyoto Pharmaceutical University, Kyoto, Japan.
Rumiko HosokiLaboratory of Regulatory Science, College of Pharmaceutical Sciences, Ritsumeikan University, Kusatsu, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural products are an excellent source of skeletons for medicinal seeds. Triterpenes and saponins are representative natural products that exhibit anti-herpes simplex virus type 1 (HSV-1) activity. However, there has been a lack of comprehensive information on the anti-HSV-1 activity of triterpenes. Therefore, expanding information on the anti-HSV-1 activity of triterpenes and improving the efficiency of their exploration are urgently required. To improve the efficiency of the development of anti-HSV-1 active compounds, we constructed a predictive model for the anti-HSV-1 activity of triterpenes by using the information obtained from previous studies using machine learning methods. In this study, we constructed a binary classification model (i.e., active or inactive) using a logistic regression algorithm. As a result of the evaluation of predictive model, the accuracy for the test data is 0.79, and the area under the curve (AUC) is 0.86. Additionally, to enrich the information on the anti-HSV-1 activity of triterpenes, a plaque reduction assay was performed on 20 triterpenes. As a result, chikusetsusaponin IVa (

Indexed as

herpes simplex virus type 1 (HSV-1)machine learingnatural productsQSARsaponintriterpene

Identifiers

PMID34796164
PMCPMC8593400

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.