Evidence map›Paper›PMID 34795381›Full record

ArticleCommunications biology2021

Whole-genome sequence analysis unveils different origins of European and Asiatic mouflon and domestication-related genes in sheep.

Ze-Hui Chen, Ya-Xi Xu, Xing-Long Xie, Dong-Feng Wang, Diana Aguilar-Gómez, Guang-Jian Liu, Xin Li, Ali Esmailizadeh, Vahideh Rezaei, Juha Kantanen and 7 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
29.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 98 citations in OpenAlex.

  1. Pooled it
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  9. Identification ofFrontiers in veterinary science · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 12 institutions in 9 countries.

Ze-Hui Chen *CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, China.
Ya-Xi Xu *College of Animal Science and Technology, China Agricultural University, Beijing, China.
Xing-Long XieCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, China.
Dong-Feng WangCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, China.ORCID http://orcid.org/0000-0002-3278-0801
Diana Aguilar-GómezCenter for Computational Biology, University of California at Berkeley, Berkeley, CA, 94720, USA.ORCID http://orcid.org/0000-0001-5930-3936
Guang-Jian LiuNovogene Co., Ltd, Tianjin, China.ORCID http://orcid.org/0000-0001-6306-5870
Xin LiCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, China.ORCID http://orcid.org/0000-0002-3575-9178
Ali EsmailizadehDepartment of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Vahideh RezaeiDepartment of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran.
Juha KantanenNatural Resources Institute Finland (Luke), Jokioinen, Finland.ORCID http://orcid.org/0000-0001-6350-6373
Innokentyi AmmosovLaboratory of Reindeer Husbandry and Traditional Industries, Yakut Scientific Research Institute of Agriculture, The Sakha Republic (Yakutia), Yakutsk, Russia.
Maryam NosratiDepartment of Agriculture, Payame Noor University, Tehran, Iran.
Kathiravan PeriasamyAnimal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, International Atomic Energy Agency, Vienna, Austria.ORCID http://orcid.org/0000-0002-3518-5290
David W ColtmanDepartment of Biological Sciences, University of Alberta, Edmonton, AB, T6G2E9, Canada.
Johannes A LenstraFaculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands.ORCID http://orcid.org/0000-0003-1745-7739
Rasmus NielsenDepartment of Integrative Biology, University of California at Berkeley, Berkeley, CA, 94720, USA. rasmus_nielsen@berkeley.edu.ORCID http://orcid.org/0000-0003-0513-6591
Meng-Hua LiCollege of Animal Science and Technology, China Agricultural University, Beijing, China. menghua.li@cau.edu.cn.ORCID http://orcid.org/0000-0001-5194-2506
Chinese Academy of Sciences · CNChina Agricultural University · CNShahid Bahonar University of Kerman · IRBerkeley College · USInternational Atomic Energy Agency · ATNatural Resources Institute Finland · FINovogene Bioinformatics Institute · CNPayame Noor University · IRUniversity of Alberta · CAUniversity of California, Berkeley · USUtrecht University · NLYakut Scientific Research Institute of Agriculture · RU

Funding

National Natural Science Foundation of China (National Science Foundation of China) Nos. 31661143014
6 · The paper itself

Abstract

The domestication and subsequent development of sheep are crucial events in the history of human civilization and the agricultural revolution. However, the impact of interspecific introgression on the genomic regions under domestication and subsequent selection remains unclear. Here, we analyze the whole genomes of domestic sheep and their wild relative species. We found introgression from wild sheep such as the snow sheep and its American relatives (bighorn and thinhorn sheep) into urial, Asiatic and European mouflons. We observed independent events of adaptive introgression from wild sheep into the Asiatic and European mouflons, as well as shared introgressed regions from both snow sheep and argali into Asiatic mouflon before or during the domestication process. We revealed European mouflons might arise through hybridization events between a now extinct sheep in Europe and feral domesticated sheep around 6000-5000 years BP. We also unveiled later introgressions from wild sheep to their sympatric domestic sheep after domestication. Several of the introgression events contain loci with candidate domestication genes (e.g., PAPPA2, NR6A1, SH3GL3, RFX3 and CAMK4), associated with morphological, immune, reproduction or production traits (wool/meat/milk). We also detected introgression events that introduced genes related to nervous response (NEURL1), neurogenesis (PRUNE2), hearing ability (USH2A), and placental viability (PAG11 and PAG3) into domestic sheep and their ancestral wild species from other wild species.

Indexed as

DomesticationGene FlowPhylogenySelection, GeneticAnimalsSheepSheep, BighornSheep, DomesticWhole Genome Sequencing

Identifiers

PMID34795381
PMCPMC8602413
OpenAlexW3212864668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.