Evidence map›Paper›PMID 34795258›Full record

ArticleNature communications2021

Diversity, multifaceted evolution, and facultative saprotrophism in the European Batrachochytrium salamandrivorans epidemic.

Moira Kelly, Frank Pasmans, Jose F Muñoz, Terrance P Shea, Salvador Carranza, Christina A Cuomo, An Martel

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Salamander-Ecology and evolution · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. In Vitro Infection Model Using A6 Cells Sets the Stage for Host-Journal of fungi (Basel, Switzerland) · 2025
    Article
  8. Quantitative support for the benefits of proactive management for wildlife disease control.Conservation biology : the journal of the Society for Conservation Biology · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Amphibian infection tolerance to chytridiomycosis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  18. Review
  19. Two-speed genome evolution drives pathogenicity in fungal pathogens of animals.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Moira KellyWildlife Health Ghent, Department of Pathology, Bacteriology and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, 9820, Merelbeke, Belgium. Moira.Kelly@ugent.be.ORCID http://orcid.org/0000-0003-4372-700X
Frank PasmansWildlife Health Ghent, Department of Pathology, Bacteriology and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, 9820, Merelbeke, Belgium.
Jose F MuñozBroad Institute of MIT and Harvard, Cambridge, 02142, MA, USA.ORCID http://orcid.org/0000-0003-4987-7957
Terrance P SheaBroad Institute of MIT and Harvard, Cambridge, 02142, MA, USA.
Salvador CarranzaInstitute of Evolutionary Biology (CSIC-UPF), 08003, Barcelona, Spain.ORCID http://orcid.org/0000-0002-5378-3008
Christina A CuomoBroad Institute of MIT and Harvard, Cambridge, 02142, MA, USA.ORCID http://orcid.org/0000-0002-5778-960X
An MartelWildlife Health Ghent, Department of Pathology, Bacteriology and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, 9820, Merelbeke, Belgium. An.Martel@ugent.be.ORCID http://orcid.org/0000-0001-7609-5649

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While emerging fungi threaten global biodiversity, the paucity of fungal genome assemblies impedes thoroughly characterizing epidemics and developing effective mitigation strategies. Here, we generate de novo genomic assemblies for six outbreaks of the emerging pathogen Batrachochytrium salamandrivorans (Bsal). We reveal the European epidemic currently damaging amphibian populations to comprise multiple, highly divergent lineages demonstrating isolate-specific adaptations and metabolic capacities. In particular, we show extensive gene family expansions and acquisitions, through a variety of evolutionary mechanisms, and an isolate-specific saprotrophic lifecycle. This finding both explains the chytrid's ability to divorce transmission from host density, producing Bsal's enigmatic host population declines, and is a key consideration in developing successful mitigation measures.

Indexed as

Evolution, MolecularGenetic VariationAcclimatizationAmphibiansAnimalsBatrachochytriumCaudataChytridiomycotaDisease OutbreaksEpidemicsEuropeGenes, FungalGenome, FungalMycosesPhylogenySequence Analysis, DNA

Identifiers

PMID34795258
PMCPMC8602665

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.