Evidence map›Paper›PMID 34795005›Full record

ArticleJournal for immunotherapy of cancer2021

Genomic alterations in biliary tract cancer predict prognosis and immunotherapy outcomes.

Xiaofeng Chen, Deqiang Wang, Jing Liu, Jingrong Qiu, Jun Zhou, Jieer Ying, Yan Shi, Zhaoxia Wang, Haizhou Lou, Jiuwei Cui and 12 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Journal for immunotherapy of cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03486678 (A Single-arm, Open-label and Exploratory Clinical Study of PD-1 Monoclonal Antibody SHR-1210 in Combination With GEMOX), which is not on this map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03486678 phase2completednot on this map

A Single-arm, Open-label and Exploratory Clinical Study of PD-1 Monoclonal Antibody SHR-1210 in Combination With GEMOX (Gemcitabine Combined Oxaliplatin) in Patients With Advanced Biliary Tract Cancer

TypeinterventionalSponsorThe First Affiliated Hospital with Nanjing Medical UniversityRan2018 to 2020Enrolled38ConditionsBiliary Tract Cancer, CholangiocarcinomaArmsSHR-1210+GEMOX
3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Pooled it
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  7. Survival outcomes and prognostic factors inFrontiers in oncology · 2026
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  14. Precision immune regulation in KRAS-mutated cancers: the final piece of the puzzle?Journal of experimental & clinical cancer research : CR · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 12 institutions in 1 country.

Xiaofeng ChenOncology, Jiangsu Province Hospital and Nanjing Medical University First Affiliated Hospital, Nanjing, Jiangsu, China.
Deqiang WangOncology, Jiangsu University Hospital, Jiangsu, China.
Jing LiuOncology, Shanghai Jiao Tong University Medical School Affiliated Ruijin Hospital, Shanghai, China.
Jingrong QiuBiological Therapy, Eastern Hepatobiliary Surgery Hospital, Shanghai, China.
Jun ZhouKey Laboratory of Carcinogenesis & Translational Research, Peking University Cancer Hospital, Beijing, Beijing, China.
Jieer YingAbdominal Medical Oncology, Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, China.
Yan ShiOncology, Shanghai Jiao Tong University Medical School Affiliated Ruijin Hospital, Shanghai, China.
Zhaoxia WangOncology, Nanjing Medical University Second Affiliated Hospital, Nanjing, Jiangsu, China.
Haizhou LouOncology, Zhejiang University School of Medicine Sir Run Run Shaw Hospital, Hangzhou, Zhejiang, China.
Jiuwei CuiCancer Center, Jilin University First Hospital, Changchun, China.
Jingdong ZhangMedical Oncology, Department of Gastrointestinal Cancer, Liaoning Cancer Institute and Hospital, Shenyang, Liaoning, China.
Yunpeng LiuDepartment of Medical Oncology, China Medical University First Hospital, Shenyang, Liaoning, China.
Fengjiao ZhaoOncology, Jiangsu Province Hospital and Nanjing Medical University First Affiliated Hospital, Nanjing, Jiangsu, China.
Lanlan PanOncology, Jiangsu Province Hospital and Nanjing Medical University First Affiliated Hospital, Nanjing, Jiangsu, China.
Jianyi ZhaoOncology, Jiangsu Province Hospital and Nanjing Medical University First Affiliated Hospital, Nanjing, Jiangsu, China.ORCID 0000-0003-2171-0856
Dongqin ZhuMedical, Nanjing Geneseeq Technology Inc, Nanjing, China.
Shiqing ChenMedical, 3D Medicines Inc, Shanghai, China.
Xiangcheng LiHepatobiliary Center, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Xue LiMedical, Nanjing Geneseeq Technology Inc, Nanjing, China.
Liuqing ZhuMedical, Nanjing Geneseeq Technology Inc, Nanjing, China.
Yang ShaoMedical, Nanjing Geneseeq Technology Inc, Nanjing, China.
Yongqian ShuOncology, Jiangsu Province Hospital and Nanjing Medical University First Affiliated Hospital, Nanjing, Jiangsu, China shuyongqian@csco.org.cn.ORCID 0000-0003-2103-0877
Jiangsu Province Hospital · CNShanghai Jiao Tong University · CNFirst Hospital of China Medical University · CNJiangsu University · CNJilin University · CNLiaoning Cancer Hospital & Institute · CNNanjing Medical University · CNPeking University · CNSecond Affiliated Hospital of Nanjing Medical University · CNSecond Military Medical University · CNSir Run Run Shaw Hospital · CNZhejiang Cancer Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRecently, immunotherapy with immune checkpoint inhibitors (ICIs) has shown promising efficacy in biliary tract cancer (BTC), which includes gallbladder cancer (GBC) and cholangiocarcinoma (CHOL). Understanding the association between immunotherapy outcomes and the genomic profile of advanced BTC may further improve the clinical benefits from immunotherapy.

methodsGenomic tumor DNA was isolated from 98 Chinese patients with advanced BTC and used for targeted next-generation sequencing of 416 cancer-related genes to identify the genomic alterations common to advanced BTC. Thirty-four patients had received ICI camrelizumab plus gemcitabine and oxaliplatin (from the NCT03486678 trial) as a first-line treatment. Tumor-infiltrating immune cells were evaluated using immunofluorescence staining.

resultsKRAS and TP53 mutations were much more frequent in the advanced-stage BTC cohort than in other cohorts with mostly early stage disease. Specifically, KRAS-TP53 co-mutations were favored in advanced CHOL, with a favorable response to immunotherapy, while single KRAS mutations predicted poor prognosis and immunotherapy outcomes for CHOL. Compared with GBC, CHOL had more mutations in genes involved in KRAS signaling; a high mutation load in these genes correlated with poor immunotherapy outcomes and may subsequently cause inferior immunotherapy outcomes for CHOL relative to GBC. Furthermore, a genomic signature including 11 genes was developed; their mutated subtype was associated with poor prognosis and immunotherapy outcomes in both CHOL and GBC. Transcriptome analyses suggested immune dysfunction in the signature mutated subtype, which was validated by tumor microenvironment (TME) evaluation based on detection of immune cell infiltration. Importantly, the signature wild-type subtype with favorable TME may be an advantageous population of immunotherapy.

conclusionsGenomic alterations in advanced BTC were associated with specific prognosis and immunotherapy outcomes. Combining genomic classification with TME evaluation further improved the stratification of immunotherapy outcomes.

Indexed as

AdultAgedAged, 80 and overBiliary Tract NeoplasmsFemaleGenomicsHumansImmunotherapyMaleMiddle AgedPrognosisRetrospective StudiesTumor Microenvironmentbiomarkersgenetic markersimmunotherapytumortumor microenvironment

Identifiers

PMID34795005
PMCPMC8603283
OpenAlexW3213028021

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.