Evidence map›Paper›PMID 34793839›Full record

ArticleThe Journal of biological chemistry2022

Structure of a photosystem I-ferredoxin complex from a marine cyanobacterium provides insights into far-red light photoacclimation.

Christopher J Gisriel, David A Flesher, Gaozhong Shen, Jimin Wang, Ming-Yang Ho, Gary W Brudvig, Donald A Bryant

Open access · goldAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Two new non-chlorophyllFrontiers in microbiology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Christopher J GisrielDepartment of Chemistry, Yale University, New Haven, Connecticut, USA.
David A FlesherDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Gaozhong ShenDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, USA.
Jimin WangDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA.
Ming-Yang HoDepartment of Life Science, National Taiwan University, Taipei, Taiwan.
Gary W BrudvigDepartment of Chemistry, Yale University, New Haven, Connecticut, USA; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA. Electronic address: gary.brudvig@yale.edu.
Donald A BryantDepartment of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania, USA. Electronic address: dab14@psu.edu.
Yale University · USPennsylvania State University · USNational Taiwan University · TW

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Photosystem II as a model protein for understanding metalloenzyme active site assemblyK99GM140174 · NIGMS · YALE UNIVERSITY · PI GISRIEL, CHRISTOPHER · 2021 to 2022
$192k
NIGMS NIH HHS K99 GM140174NIGMS NIH HHS P41 GM103311
6 · The paper itself

Abstract

Far-red light photoacclimation exhibited by some cyanobacteria allows these organisms to use the far-red region of the solar spectrum (700-800 nm) for photosynthesis. Part of this process includes the replacement of six photosystem I (PSI) subunits with isoforms that confer the binding of chlorophyll (Chl) f molecules that absorb far-red light (FRL). However, the exact sites at which Chl f molecules are bound are still challenging to determine. To aid in the identification of Chl f-binding sites, we solved the cryo-EM structure of PSI from far-red light-acclimated cells of the cyanobacterium Synechococcus sp. PCC 7335. We identified six sites that bind Chl f with high specificity and three additional sites that are likely to bind Chl f at lower specificity. All of these binding sites are in the core-antenna regions of PSI, and Chl f was not observed among the electron transfer cofactors. This structural analysis also reveals both conserved and nonconserved Chl f-binding sites, the latter of which exemplify the diversity in FRL-PSI among species. We found that the FRL-PSI structure also contains a bound soluble ferredoxin, PetF1, at low occupancy, which suggests that ferredoxin binds less transiently than expected according to the canonical view of ferredoxin-binding to facilitate electron transfer. We suggest that this may result from structural changes in FRL-PSI that occur specifically during FRL photoacclimation.

Indexed as

FerredoxinsPhotosystem I Protein ComplexSynechococcusChlorophyllLightPhotosynthesisChlorophyllFerredoxinsPhotosystem I Protein Complexchlorophyll fcyanobacteriafar-red light photoacclimationferredoxinphotosynthesisphotosystem IPsaFPsaJ

Identifiers

PMID34793839
PMCPMC8689207
OpenAlexW3214379608

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.