Evidence map›Paper›PMID 34792663›Full record

ArticleMedical oncology (Northwood, London, England)2021

Detection of human papillomavirus infection in oral cancers reported at dental facility: assessing the utility of FFPE tissues.

Gaurav Verma, Nikita Aggarwal, Suhail Chhakara, Abhishek Tyagi, Kanchan Vishnoi, Mohit Jadli, Tejveer Singh, Ankit Goel, Durgatosh Pandey, Ankita Sharma and 7 more

Abstract read
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In one paragraph

Article in Medical oncology (Northwood, London, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 3 pooled it
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 3 syntheses or guidelines pooled it, 6 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Gaurav VermaDivision of Molecular Oncology, ICMR- National Institute of Cancer Prevention and Research, Noida, Uttar Pradesh, India.
Nikita AggarwalMolecular Oncology Laboratory, Department of Zoology, University of Delhi, New Delhi, 110007, India.
Suhail ChhakaraMolecular Oncology Laboratory, Department of Zoology, University of Delhi, New Delhi, 110007, India.
Abhishek TyagiDivision of Molecular Oncology, ICMR- National Institute of Cancer Prevention and Research, Noida, Uttar Pradesh, India.
Kanchan VishnoiDivision of Molecular Oncology, ICMR- National Institute of Cancer Prevention and Research, Noida, Uttar Pradesh, India.
Mohit JadliMolecular Oncology Laboratory, Department of Zoology, University of Delhi, New Delhi, 110007, India.
Tejveer SinghMolecular Oncology Laboratory, Department of Zoology, University of Delhi, New Delhi, 110007, India.
Ankit GoelSubharti Dental College, Meerut, Uttar Pradesh, India.
Durgatosh PandeyDepartment of Oncosurgery, Dr. Bheem Rao Ambedkar Institute-Rotary Cancer Hospital, All India Institute of Medical Sciences, New Delhi, India.
Ankita SharmaLady Hardinge Medical College, New Delhi, India.
Kiran AgarwalLady Hardinge Medical College, New Delhi, India.
Urmi SarkarRajiv Gandhi Cancer Institute & Research Centre, New Delhi, India.
Dinesh Chandra DovalRajiv Gandhi Cancer Institute & Research Centre, New Delhi, India.
Shashi SharmaDivision of Molecular Oncology, ICMR- National Institute of Cancer Prevention and Research, Noida, Uttar Pradesh, India.
Ravi MehrotraDivision of Molecular Oncology, ICMR- National Institute of Cancer Prevention and Research, Noida, Uttar Pradesh, India.
Sukh Mahendra SinghSchool of Biotechnology, Banaras Hindu University, Varanasi, Uttar Pradesh, India.
Alok Chandra BhartiDivision of Molecular Oncology, ICMR- National Institute of Cancer Prevention and Research, Noida, Uttar Pradesh, India. alokchandrab@yahoo.com.ORCID http://orcid.org/0000-0002-5996-2832
National Institute of Cancer Prevention and Research · INUniversity of Delhi · INLady Hardinge Medical College · INRajiv Gandhi Cancer Institute and Research Centre · INBanaras Hindu University · INDR. B.R.A. Institute Rotary Cancer Hospital · INSubharti Medical College · IN

Funding

CCRH 17-51/2016-17/CCRH/Tech/Coll./DU-Cervical Cancer.4850council of scientific and industrial research, india 17/12/2017(ii) EU-Vdepartment of biotechnology , ministry of science and technology DBT:6242-P34/RGCB/PMD/DBT/ALCB/2015indian council of medical research 3/2/2/278/2014/NCDIIIindian council of medical research 81/3/2009/BMS/Stem Cellindian council of medical research HIV/50/139/20101-ECDIIuniversity grants commission 2061430699 22/06/2014 (i)EU-Vuniversity grants commission F.2-2/2009 (SA-I)
6 · The paper itself

Abstract

Incidence of human papillomavirus (HPV)-associated oral cancers is on the rise. However, epidemiological data of this subset of cancers are limited. Dental hospital poses a unique advantage in detection of HPV-positive oral malignancies. We assessed the utility of formalin-fixed paraffin-embedded (FFPE) tissues, which are readily available, for evaluation of high-risk HPV infection in oral cancer. For protocol standardization, we used 20 prospectively collected paired FFPE and fresh tissues of histopathologically confirmed oral cancer cases reported in Oral Medicine department of a dental hospital for comparative study. Only short PCRs (~ 200 bp) of DNA isolated using a modified xylene-free method displayed a concordant HPV result. For HPV analysis, we used additional 30 retrospectively collected FFPE tissues. DNA isolated from these specimens showed an overall 23.4% (11/47) HPV positivity with detection of HPV18. Comparison of HPV positivity from dental hospital FFPE specimens with overall HPV positivity of freshly collected oral cancer specimens (n = 55) from three cancer care hospitals of the same region showed notable difference (12.7%; 7/55). Further, cancer hospital specimens showed HPV16 positivity and displayed a characteristic difference in reported sub-sites and patient spectrum. Overall, using a xylene-free FFPE DNA isolation method clubbed with short amplicon PCR, we showed detection of HPV-positive oral cancer in dental hospitals.

Indexed as

Dental FacilitiesAdultAgedAlphapapillomavirusDNA, ViralFemaleFormaldehydeGenotypeHumansIndiaMaleMiddle AgedMouth NeoplasmsPapillomavirus InfectionsParaffin EmbeddingPolymerase Chain ReactionDNA, ViralFormaldehydeDental hospitalFormalin-fixed paraffin-embeddedHuman papillomavirusOral cancerXylene-free DNA isolation

Identifiers

PMID34792663
OpenAlexW3190329343

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.