Evidence map›Paper›PMID 34791326›Full record

ArticleThe Journal of clinical endocrinology and metabolism2022

Recurrence of Papillary Thyroid Cancer: A Systematic Appraisal of Risk Factors.

Hannah R Nieto, Caitlin E M Thornton, Katie Brookes, Albert Nobre de Menezes, Alice Fletcher, Mohammed Alshahrani, Merve Kocbiyik, Neil Sharma, Kristien Boelaert, Jean-Baptiste Cazier and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

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  18. Combined Vorinostat and Chloroquine Inhibit Sodium-Iodide Symporter Endocytosis and Enhance Radionuclide Uptake In Vivo.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Hannah R NietoInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.ORCID 0000-0003-3088-7848
Caitlin E M ThorntonInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.
Katie BrookesInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.
Albert Nobre de MenezesCentre for Computational Biology, University of Birmingham, Birmingham B15 2TT, UK.
Alice FletcherInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.
Mohammed AlshahraniInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.
Merve KocbiyikInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.
Neil SharmaInstitute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK.
Kristien BoelaertInstitute of Applied Health Research, University of Birmingham, Birmingham B15 2TT, UK.
Jean-Baptiste CazierCentre for Computational Biology, University of Birmingham, Birmingham B15 2TT, UK.ORCID 0000-0001-7581-9051
Hisham MehannaInstitute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK.ORCID 0000-0002-5544-6224
Vicki E SmithInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.
Martin L ReadInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.ORCID 0000-0001-8918-4333
Christopher J McCabeInstitute of Metabolism and Systems Research, University of Birmingham, Birmingham B15 2TT, UK.ORCID 0000-0002-8687-3405
University of Birmingham · GB

Funding

Medical Research Council
6 · The paper itself

Abstract

contextThyroid cancer recurrence is associated with increased mortality and adverse outcomes. Recurrence risk is currently predicted using clinical tools, often restaging patients after treatment. Detailed understanding of recurrence risk at disease onset could lead to personalized and improved patient care.

objectiveWe aimed to perform a comprehensive bioinformatic and experimental analysis of 3 levels of genetic change (mRNA, microRNA, and somatic mutation) apparent in recurrent tumors and construct a new combinatorial prognostic risk model.

methodsWe analyzed The Cancer Genome Atlas data (TCGA) to identify differentially expressed genes (mRNA/microRNA) in 46 recurrent vs 455 nonrecurrent thyroid tumors. Two exonic mutational pipelines were used to identify somatic mutations. Functional gene analysis was performed in cell-based assays in multiple thyroid cell lines. The prognostic value of genes was evaluated with TCGA datasets.

resultsWe identified 128 new potential biomarkers associated with recurrence, including 40 mRNAs, 39 miRNAs, and 59 genetic variants. Among differentially expressed genes, modulation of FN1, ITGα3, and MET had a significant impact on thyroid cancer cell migration. Similarly, ablation of miR-486 and miR-1179 significantly increased migration of TPC-1 and SW1736 cells. We further utilized genes with a validated functional role and identified a 5-gene risk score classifier as an independent predictor of thyroid cancer recurrence.

conclusionOur newly proposed risk model based on combinatorial mRNA and microRNA expression has potential clinical utility as a prognostic indicator of recurrence. These findings should facilitate earlier prediction of recurrence with implications for improving patient outcome by tailoring treatment to disease risk and increasing posttreatment surveillance.

Indexed as

MicroRNAsThyroid NeoplasmsBiomarkers, TumorGene Expression Regulation, NeoplasticHumansNeoplasm Recurrence, LocalPrognosisRisk FactorsRNA, MessengerThyroid Cancer, PapillaryBiomarkers, TumorMicroRNAsMIRN1179 microRNA, humanRNA, MessengermiRNApapillaryrecurrenceTCGAthyroid

Identifiers

PMID34791326
PMCPMC9016467
OpenAlexW3214287179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.