Evidence map›Paper›PMID 34791169›Full record

ArticleG3 (Bethesda, Md.)2022

Identification of a novel Candida metapsilosis isolate reveals multiple hybridization events.

Caoimhe E O'Brien, Bing Zhai, Mihaela Ola, Sean A Bergin, Eoin Ó Cinnéide, Ísla O'Connor, Thierry Rolling, Edwin Miranda, N Esther Babady, Tobias M Hohl and 1 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Genetic and environmental control of parasexual reproduction in the pathogenicMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  2. Article
  3. Article
  4. Threats from theMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  5. Review
  6. Analysis of clinicalAntimicrobial agents and chemotherapy · 2024
    Article
  7. Article
  8. Candida parapsilosis complex in the clinical setting.Nature reviews. Microbiology · 2024
    Review
  9. Analysis of clinicalbioRxiv : the preprint server for biology · 2023
    Article
  10. Article
  11. Article
  12. JLOH: Inferring loss of heterozygosity blocks from sequencing data.Computational and structural biotechnology journal · 2023
    Article
  13. Article
  14. Draft Genome Sequence of a Diploid and HybridMicrobiology resource announcements · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Caoimhe E O'BrienSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin 4, Ireland.
Bing ZhaiInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Mihaela OlaSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin 4, Ireland.
Sean A BerginSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin 4, Ireland.
Eoin Ó CinnéideSchool of Medicine, Conway Institute, University College Dublin, Dublin 4, Ireland.ORCID 0000-0002-3148-842X
Ísla O'ConnorSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin 4, Ireland.
Thierry RollingInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Edwin MirandaInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
N Esther BabadyInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Tobias M HohlInfectious Disease Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.ORCID 0000-0002-9097-5412
Geraldine ButlerSchool of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Dublin 4, Ireland.ORCID 0000-0002-1770-5301
University College Dublin · IEMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
INITIATION OF THE IMMUNE RESPONSE TO ASPERGILLUS FUMIGATUSR01AI093808 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HOHL, TOBIAS M · 2011 to 2020
$4.9M
The mycobiota, bone marrow transplantation, and clinical outcomesR21AI156157 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI HOHL, TOBIAS M · 2021 to 2022
$487k
NCI NIH HHS P30 CA008748NIAID NIH HHS R01 AI093808NIAID NIH HHS R21 AI156157Wellcome TrustWellcome Trust 109167/Z/15/Z
6 · The paper itself

Abstract

Candida metapsilosis is a member of the Candida parapsilosis species complex, a group of opportunistic human pathogens. Of all the members of this complex, C. metapsilosis is the least virulent, and accounts for a small proportion of invasive Candida infections. Previous studies established that all C. metapsilosis isolates are hybrids, originating from a single hybridization event between two lineages, parent A and parent B. Here, we use MinION and Illumina sequencing to characterize a C. metapsilosis isolate that originated from a separate hybridization. One of the parents of the new isolate is very closely related to parent A. However, the other parent (parent C) is not the same as parent B. Unlike C. metapsilosis AB isolates, the C. metapsilosis AC isolate has not undergone introgression at the mating type-like locus. In addition, the A and C haplotypes are not fully collinear. The C. metapsilosis AC isolate has undergone loss of heterozygosity with a preference for haplotype A, indicating that this isolate is in the early stages of genome stabilization.

Indexed as

Candida parapsilosisCandidiasisAntifungal AgentsCandidaGenomeHumansHybridization, GeneticAntifungal AgentsCandidagenomicshybridizationLOHmating type-like loci

Identifiers

PMID34791169
PMCPMC8727981
OpenAlexW3208685707

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.