Evidence map›Paper›PMID 34790173›Full record

ArticleFrontiers in microbiology2021

Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria and Archaea Along a Mediterranean-Atlantic Gradient.

Blandine Trouche, Miriam I Brandt, Caroline Belser, Covadonga Orejas, Stéphane Pesant, Julie Poulain, Patrick Wincker, Jean-Christophe Auguet, Sophie Arnaud-Haond, Loïs Maignien

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Blandine TroucheUniv Brest, CNRS, IFREMER, Microbiology of Extreme Environments Laboratory (LM2E), Plouzané, France.
Miriam I BrandtMARBEC, Univ Montpellier, Ifremer, IRD, CNRS, Sète, France.
Caroline BelserGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Évry, Université Paris-Saclay, Evry, France.
Covadonga OrejasCentro Oceanográfico de Baleares, Instituto Español de Oceanografía, Palma de Mallorca, Spain.
Stéphane PesantEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Cambridge, United Kingdom.
Julie PoulainGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Évry, Université Paris-Saclay, Evry, France.
Patrick WinckerGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ. Évry, Université Paris-Saclay, Evry, France.
Jean-Christophe AuguetMARBEC, Univ Montpellier, CNRS, IFREMER, IRD, Montpellier, France.
Sophie Arnaud-HaondMARBEC, Univ Montpellier, Ifremer, IRD, CNRS, Sète, France.
Loïs MaignienUniv Brest, CNRS, IFREMER, Microbiology of Extreme Environments Laboratory (LM2E), Plouzané, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seafloor sediments cover the majority of planet Earth and microorganisms inhabiting these environments play a central role in marine biogeochemical cycles. Yet, description of the biogeography and distribution of sedimentary microbial life is still too sparse to evaluate the relative contribution of processes driving this distribution, such as the levels of drift, connectivity, and specialization. To address this question, we analyzed 210 archaeal and bacterial metabarcoding libraries from a standardized and horizon-resolved collection of sediment samples from 18 stations along a longitudinal gradient from the eastern Mediterranean to the western Atlantic. Overall, we found that biogeographic patterns depended on the scale considered: while at local scale the selective influence of contemporary environmental conditions appeared strongest, the heritage of historic processes through dispersal limitation and drift became more apparent at regional scale, and ended up superseding contemporary influences at inter-regional scale. When looking at environmental factors, the structure of microbial communities was correlated primarily with water depth, with a clear transition between 800 and 1,200 meters below sea level. Oceanic basin, water temperature, and sediment depth were other important explanatory parameters of community structure. Finally, we propose increasing dispersal limitation and ecological drift with sediment depth as a probable factor for the enhanced divergence of deeper horizons communities.

Indexed as

bathyal zonebenthic microbiologybiogeographydispersal limitationdistance-decay relationshipdriftmetabarcodingseafloor sediment

Identifiers

PMID34790173
PMCPMC8591283

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.