Evidence map›Paper›PMID 34789765›Full record

ArticleNature communications2021

Single cell multi-omic analysis identifies a Tbx1-dependent multilineage primed population in murine cardiopharyngeal mesoderm.

Hiroko Nomaru, Yang Liu, Christopher De Bono, Dario Righelli, Andrea Cirino, Wei Wang, Hansoo Song, Silvia E Racedo, Anelisa G Dantas, Lu Zhang and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 54 citations in OpenAlex.

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  14. The molecular mechanisms of cardiac development and related diseases.Signal transduction and targeted therapy · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 4 countries.

Hiroko NomaruDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Yang Liu *Department of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Christopher De Bono *Department of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Dario RighelliInstitute for Applied Computing, National Research Council, Naples, Italy.
Andrea CirinoDepartment of Molecular Medicine and Medical Biotechnology, University Federico II School of Medicine, Naples, Italy.
Wei WangCenter for Developmental Genetics, Department of Biology, New York University, New York, NY, USA.
Hansoo SongDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0002-4720-5615
Silvia E RacedoDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Anelisa G DantasDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Lu ZhangDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA.
Chen-Leng CaiDepartment of Pediatrics, Indiana University School of Medicine, Indianapolis, IN, USA.
Claudia AngeliniInstitute for Applied Computing, National Research Council, Naples, Italy.
Lionel ChristiaenCenter for Developmental Genetics, Department of Biology, New York University, New York, NY, USA.ORCID http://orcid.org/0000-0001-5930-5667
Robert G KellyAix-Marseille University, CNRS UMR 7288, IBDM, Marseille, France.
Antonio BaldiniDepartment of Molecular Medicine and Medical Biotechnology, University Federico II School of Medicine, Naples, Italy.
Deyou ZhengDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0003-4354-5337
Bernice E MorrowDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA. bernice.morrow@einsteinmed.org.ORCID http://orcid.org/0000-0002-8076-4726
Albert Einstein College of Medicine · USFederico II University Hospital · ITIndiana University School of MedicineNew York University · USCentre National de la Recherche Scientifique · FRInstitute for High Performance Computing and Networking · ITUniversity of Padua · IT

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Project 2: Genetic Mechanisms of Non-syndromic Congenital Cardiac DefectsP01HD070454 · NICHD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI MORROW, BERNICE E · 2011 to 2020
$14.0M
Regulation of muscle fate specification and cell migration in cardiogenic lineageR01HL108643 · NHLBI · NEW YORK UNIVERSITY · PI MOGILNER, ALEXANDER · 2011 to 2023
$5.4M
Cell fate choices by Tbx1 in forming the mammalian heartR01HL153920 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI BERNICE E MORROW, Deyou Zheng · 2020 to 2026
$4.0M
Modeling Gene Regulatory Networks for Early Cardiopharyngeal DevelopmentR01HD096770 · NICHD · NEW YORK UNIVERSITY · PI BONNEAU, RICHARD A, CHRISTIAEN, LIONEL · 2018 to 2022
$3.0M
T-box transcription factor Tbx2 in coronary vascular development and diseaseR01HL131735 · NHLBI · INDIANA UNIVERSITY INDIANAPOLIS · PI CAI, CHENLENG · 2017 to 2020
$2.0M
Deciphering the mechanisms of c-kit+ cells in heart repairR01HL137036 · NHLBI · INDIANA UNIVERSITY INDIANAPOLIS · PI SHOU, WEINIAN · 2018 to 2021
$1.6M
Tbx1 and canonical Wnt signaling in the second heart fieldR56HL129807 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CAI, CHENLENG, MORROW, BERNICE E · 2015 to 2015
$705k
NCI NIH HHS P30 CA016087NHLBI NIH HHS R01 HL108643NHLBI NIH HHS R01 HL131735NHLBI NIH HHS R01 HL137036NHLBI NIH HHS R01 HL153920NHLBI NIH HHS R56 HL129807NICHD NIH HHS P01 HD070454NICHD NIH HHS R01 HD096770
6 · The paper itself

Abstract

The poles of the heart and branchiomeric muscles of the face and neck are formed from the cardiopharyngeal mesoderm within the pharyngeal apparatus. They are disrupted in patients with 22q11.2 deletion syndrome, due to haploinsufficiency of TBX1, encoding a T-box transcription factor. Here, using single cell RNA-sequencing, we now identify a multilineage primed population within the cardiopharyngeal mesoderm, marked by Tbx1, which has bipotent properties to form cardiac and branchiomeric muscle cells. The multilineage primed cells are localized within the nascent mesoderm of the caudal lateral pharyngeal apparatus and provide a continuous source of cardiopharyngeal mesoderm progenitors. Tbx1 regulates the maturation of multilineage primed progenitor cells to cardiopharyngeal mesoderm derivatives while restricting ectopic non-mesodermal gene expression. We further show that TBX1 confers this balance of gene expression by direct and indirect regulation of enriched genes in multilineage primed progenitors and downstream pathways, partly through altering chromatin accessibility, the perturbation of which can lead to congenital defects in individuals with 22q11.2 deletion syndrome.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsBranchial RegionCell DifferentiationCell LineageGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Regulatory NetworksHeartMesodermMiceMice, TransgenicMuscle, SkeletalMyocardiumSingle-Cell AnalysisStem CellsBasic Helix-Loop-Helix ProteinsMesp1 protein, mouseT-Box Domain ProteinsTbx1 protein, mouse

Identifiers

PMID34789765
PMCPMC8599455
OpenAlexW3213524693

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.