Evidence map›Paper›PMID 34785720›Full record

ArticleScientific reports2021

Muscle transcriptome provides the first insight into the dynamics of gene expression with progression of age in sheep.

Reena Arora, Naveen Kumar Siddaraju, S S Manjunatha, S Sudarshan, Mohamed Nadeem Fairoze, Ashish Kumar, Pooja Chhabra, Mandeep Kaur, R M Sreesujatha, Sonika Ahlawat and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

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  7. Molecular insights into Pashmina fiber production: comparative skin transcriptomic analysis of Changthangi goats and sheep.Mammalian genome : official journal of the International Mammalian Genome Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Reena AroraAnimal Biotechnology Division, ICAR-National Bureau of Animal Genetic Resources, G T Road By-Pass, P O Box 129, Karnal, 132001, Haryana, India. rejagati@gmail.com.
Naveen Kumar SiddarajuKarnataka Veterinary Animal and Fisheries Sciences University, Bangalore, 560024, India.
S S ManjunathaKarnataka Veterinary Animal and Fisheries Sciences University, Bangalore, 560024, India.
S SudarshanKarnataka Veterinary Animal and Fisheries Sciences University, Bangalore, 560024, India.
Mohamed Nadeem FairozeKarnataka Veterinary Animal and Fisheries Sciences University, Bangalore, 560024, India.
Ashish KumarAnimal Biotechnology Division, ICAR-National Bureau of Animal Genetic Resources, G T Road By-Pass, P O Box 129, Karnal, 132001, Haryana, India.
Pooja ChhabraAnimal Biotechnology Division, ICAR-National Bureau of Animal Genetic Resources, G T Road By-Pass, P O Box 129, Karnal, 132001, Haryana, India.
Mandeep KaurAnimal Biotechnology Division, ICAR-National Bureau of Animal Genetic Resources, G T Road By-Pass, P O Box 129, Karnal, 132001, Haryana, India.
R M SreesujathaKarnataka Veterinary Animal and Fisheries Sciences University, Bangalore, 560024, India.
Sonika AhlawatAnimal Biotechnology Division, ICAR-National Bureau of Animal Genetic Resources, G T Road By-Pass, P O Box 129, Karnal, 132001, Haryana, India.
Ramesh Kumar VijhAnimal Biotechnology Division, ICAR-National Bureau of Animal Genetic Resources, G T Road By-Pass, P O Box 129, Karnal, 132001, Haryana, India.
National Bureau of Animal Genetic Resources · INKarnataka Veterinary Animal and Fisheries Sciences University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dynamic synergy of genes and pathways in muscles in relation to age affects the muscle characteristics. Investigating the temporal changes in gene expression will help illustrate the molecular mechanisms underlying muscle development. Here we report the gene expression changes in skeletal muscles through successive age groups in Bandur, a meat type sheep of India. RNA sequencing data was generated from the longissimus thoracis muscles from four age groups, ranging from lamb to adult. Analysis of 20 highest expressed genes common across the groups revealed muscle protein, phosphorylation, acetylation, metal binding and transport as significant functions. Maximum differentiation was observed after 2.5-3 years on transition from lambs to adult. Transcriptional regulation by the TFAP2 transcription factors, IL-6 signaling and PI3K/AKT signaling pathways were enriched in younger animals. The gene-protein network demarcated key interactive genes involved in muscle development and proliferation that can be used as candidates for future research on improvement of muscle characteristics.

Indexed as

Signal TransductionTranscriptomeAgingAnimalsMaleMuscle ProteinsMuscle, SkeletalSheepMuscle Proteins

Identifiers

PMID34785720
PMCPMC8595721
OpenAlexW3212463564

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.