Evidence map›Paper›PMID 34785657›Full record

ArticleNature communications2021

Programmable viscoelasticity in protein-RNA condensates with disordered sticker-spacer polypeptides.

Ibraheem Alshareedah, Mahdi Muhammad Moosa, Matthew Pham, Davit A Potoyan, Priya R Banerjee

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 189 papers.

0numbers the graph read from it
0cells of the map it votes in
189citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

189 citing papers in PubMed.

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  16. The Polymers of Life: Exploring Cellular Function Through Polymer Concepts.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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129 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ibraheem AlshareedahDepartment of Physics, University at Buffalo, Buffalo, NY, 14260, USA.ORCID http://orcid.org/0000-0003-0845-3250
Mahdi Muhammad MoosaDepartment of Physics, University at Buffalo, Buffalo, NY, 14260, USA.ORCID http://orcid.org/0000-0002-2823-3178
Matthew PhamDepartment of Chemistry, Iowa State University, Ames, IA, 50011, USA.
Davit A PotoyanDepartment of Chemistry, Iowa State University, Ames, IA, 50011, USA. potoyan@iastate.edu.ORCID http://orcid.org/0000-0002-5860-1699
Priya R BanerjeeDepartment of Physics, University at Buffalo, Buffalo, NY, 14260, USA. prbanerj@buffalo.edu.ORCID http://orcid.org/0000-0002-6169-1461

Funding

Quantifying Physiologic and Pathologic Viscoelastic Phases of Biomolecular Condensates by Correlative Force and Fluorescence MicroscopyR35GM138186 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BANERJEE, PRIYA R. · 2020 to 2025
$4.4M
Multi-scale computational investigation of functions and mechanisms of protein-RNA phase separation.R35GM138243 · NIGMS · IOWA STATE UNIVERSITY · PI Davit POTOYAN · 2020 to 2026
$2.4M
NIGMS NIH HHS R35 GM138186NIGMS NIH HHS R35 GM138243
6 · The paper itself

Abstract

Liquid-liquid phase separation of multivalent proteins and RNAs drives the formation of biomolecular condensates that facilitate membrane-free compartmentalization of subcellular processes. With recent advances, it is becoming increasingly clear that biomolecular condensates are network fluids with time-dependent material properties. Here, employing microrheology with optical tweezers, we reveal molecular determinants that govern the viscoelastic behavior of condensates formed by multivalent Arg/Gly-rich sticker-spacer polypeptides and RNA. These condensates behave as Maxwell fluids with an elastically-dominant rheological response at shorter timescales and a liquid-like behavior at longer timescales. The viscous and elastic regimes of these condensates can be tuned by the polypeptide and RNA sequences as well as their mixture compositions. Our results establish a quantitative link between the sequence- and structure-encoded biomolecular interactions at the microscopic scale and the rheological properties of the resulting condensates at the mesoscale, enabling a route to systematically probe and rationally engineer biomolecular condensates with programmable mechanics.

Indexed as

Base SequenceBiomolecular CondensatesBiophysicsGenetic TechniquesIntrinsically Disordered ProteinsMicroscopyOptical TweezersPeptidesProteinsRNASoftwareViscosityIntrinsically Disordered ProteinsPeptidesProteinsRNA

Identifiers

PMID34785657
PMCPMC8595643

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.