Evidence map›Paper›PMID 34785652›Full record

ArticleNature communications2021

Revealing nonlinear neural decoding by analyzing choices.

Qianli Yang, Edgar Walker, R James Cotton, Andreas S Tolias, Xaq Pitkow

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  4. Broadband synergy versus oscillatory redundancy in the visual cortex.bioRxiv : the preprint server for biology · 2025
    Article
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  12. Rational thoughts in neural codes.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Qianli YangDepartment of Electrical and Computer Engineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0003-4226-2319
Edgar WalkerDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
R James CottonShirley Ryan Ability Lab, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-5714-1400
Andreas S ToliasDepartment of Electrical and Computer Engineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0002-4305-6376
Xaq PitkowDepartment of Electrical and Computer Engineering, Rice University, Houston, TX, USA. xaq@rice.edu.ORCID http://orcid.org/0000-0001-6376-329X

Funding

KITP Interdisciplinary Biology InitiativeR25GM067110 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SHRAIMAN, BORIS I · 2003 to 2018
$1.8M
NIGMS NIH HHS R25 GM067110
6 · The paper itself

Abstract

Sensory data about most natural task-relevant variables are entangled with task-irrelevant nuisance variables. The neurons that encode these relevant signals typically constitute a nonlinear population code. Here we present a theoretical framework for quantifying how the brain uses or decodes its nonlinear information. Our theory obeys fundamental mathematical limitations on information content inherited from the sensory periphery, describing redundant codes when there are many more cortical neurons than primary sensory neurons. The theory predicts that if the brain uses its nonlinear population codes optimally, then more informative patterns should be more correlated with choices. More specifically, the theory predicts a simple, easily computed quantitative relationship between fluctuating neural activity and behavioral choices that reveals the decoding efficiency. This relationship holds for optimal feedforward networks of modest complexity, when experiments are performed under natural nuisance variation. We analyze recordings from primary visual cortex of monkeys discriminating the distribution from which oriented stimuli were drawn, and find these data are consistent with the hypothesis of near-optimal nonlinear decoding.

Indexed as

AlgorithmsAnimalsBrainModels, NeurologicalModels, TheoreticalNeuronsPrimary Visual Cortex

Identifiers

PMID34785652
PMCPMC8595442

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.