Evidence map›Paper›PMID 34782858›Full record

ArticleMicrobial cell (Graz, Austria)2021

Urm1, not quite a ubiquitin-like modifier?

Lars Kaduhr, Cindy Brachmann, Keerthiraju Ethiraju Ravichandran, James D West, Sebastian Glatt, Raffael Schaffrath

Open access · goldAbstract readComment
In one paragraph

Article in Microbial cell (Graz, Austria), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lars KaduhrUniversität Kassel, Institut für Biologie, Fachgebiet Mikrobiologie, Heinrich-Plett-Str. 40, 34132 Kassel, Germany.
Cindy BrachmannUniversität Kassel, Institut für Biologie, Fachgebiet Mikrobiologie, Heinrich-Plett-Str. 40, 34132 Kassel, Germany.
Keerthiraju Ethiraju RavichandranMalopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland.
James D WestBiochemistry & Molecular Biology Program, Departments of Biology and Chemistry, The College of Wooster, Wooster, OH, USA.
Sebastian GlattMalopolska Centre of Biotechnology, Jagiellonian University, 30-387 Krakow, Poland.
Raffael SchaffrathUniversität Kassel, Institut für Biologie, Fachgebiet Mikrobiologie, Heinrich-Plett-Str. 40, 34132 Kassel, Germany.
Jagiellonian University · PLCollege of Wooster · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ubiquitin related modifier 1 (Urm1) is a unique eukaryotic member of the ubiquitin-fold (UbF) protein family and conserved from yeast to humans. Urm1 is dual-functional, acting both as a sulfur carrier for thiolation of tRNA anticodons and as a protein modifier in a lysine-directed Ub-like conjugation also known as urmylation. Although Urm1 conjugation coincides with oxidative stress and targets proteins like 2-Cys peroxiredoxins from yeast (Ahp1) and fly (Prx5), it was unclear how urmylation proceeds molecularly and whether it is affected by the activity of these antioxidant enzymes. An in-depth study of Ahp1 urmylation in yeast from our laboratory (Brachmann

Indexed as

peroxiredoxin Ahp1protein urmylationtRNA thiolationUrm1yeast

Identifiers

PMID34782858
PMCPMC8561144
OpenAlexW3208047488

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.