Evidence map›Paper›PMID 34782682›Full record

ArticleScientific reports2021

Comparative proteomic analysis provides new insights into regulation of microspore embryogenesis induction in winter triticale (× Triticosecale Wittm.) after 5-azacytidine treatment.

Monika Krzewska, Ewa Dubas, Gabriela Gołębiowska, Anna Nowicka, Agnieszka Janas, Kamil Zieliński, Ewa Surówka, Przemysław Kopeć, Przemysław Mielczarek, Iwona Żur

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Phenol-Based Protein Extraction Method for Plant Proteomic Studies.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Monika KrzewskaThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland. m.krzewska@ifr-pan.edu.pl.
Ewa DubasThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
Gabriela GołębiowskaChair of Genetics, Institute of Biology, Pedagogical University of Krakow, Podchorążych 2, 31-084, Kraków, Poland.
Anna NowickaThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
Agnieszka JanasThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
Kamil ZielińskiThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
Ewa SurówkaThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
Przemysław KopećThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
Przemysław MielczarekDepartment of Analytical Chemistry and Biochemistry, Faculty of Materials Science and Ceramics, AGH University of Science and Technology, Mickiewicza 30 ave., 30-059, Kraków, Poland.
Iwona ŻurThe Franciszek Górski Institute of Plant Physiology Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland. i.zur@ifr-pan.edu.pl.
Polish Academy of Sciences · PLFranciszek Górski Institute of Plant Physiology · PLAGH University of Krakow · PLUniwersytet Komisji Edukacji Narodowej w Krakowie · PL

Funding

Institutional funding of the Institute of Plant Physiology Polish Academy of Sciences T1Zb2/2018Ministry of Science and Higher Education of the Republic of Poland 1/5457/E-189/M/2017
6 · The paper itself

Abstract

Effective microspore embryogenesis (ME) requires substantial modifications in gene expression pattern, followed by changes in the cell proteome and its metabolism. Recent studies have awakened also interest in the role of epigenetic factors in microspore de-differentiation and reprogramming. Therefore, demethylating agent (2.5-10 μM 5-azacytidine, AC) together with low temperature (3 weeks at 4 °C) were used as ME-inducing tiller treatment in two doubled haploid (DH) lines of triticale and its effect was analyzed in respect of anther protein profiles, expression of selected genes (TAPETUM DETERMINANT1 (TaTPD1-like), SOMATIC EMBRYOGENESIS RECEPTOR KINASE 2 (SERK2) and GLUTATHIONE S-TRANSFERASE (GSTF2)) and ME efficiency. Tiller treatment with 5.0 µM AC was the most effective in ME induction; it was associated with (1) suppression of intensive anabolic processes-mainly photosynthesis and light-dependent reactions, (2) transition to effective catabolism and mobilization of carbohydrate reserve to meet the high energy demand of cells during microspore reprograming and (3) effective defense against stress-inducing treatment, i.e. protection of proper folding during protein biosynthesis and effective degradation of dysfunctional or damaged proteins. Additionally, 5.0 µM AC enhanced the expression of all genes previously identified as being associated with embryogenic potential of microspores (TaTPD1-like, SERK and GSTF2).

Indexed as

Embryonic DevelopmentProteomeProteomicsAzacitidineComputational BiologyGene Expression Regulation, PlantPlant DevelopmentPlant ProteinsTriticaleAzacitidinePlant ProteinsProteome

Identifiers

PMID34782682
PMCPMC8593058
OpenAlexW3213786716

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.