Evidence map›Paper›PMID 34780917›Full record

ArticleNeuroImage2021

Unraveling somatotopic organization in the human brain using machine learning and adaptive supervoxel-based parcellations.

Kyle B See, David J Arpin, David E Vaillancourt, Ruogu Fang, Stephen A Coombes

Open access · goldAbstract read
In one paragraph

Article in NeuroImage, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kyle B SeeJ. Crayton Pruitt Family Department of Biomedical Engineering, Smart Medical Informatics Learning and Evaluation Lab, College of Engineering, University of Florida, PO Box 116131, Gainesville, FL, United States.
David J ArpinLaboratory for Rehabilitation Neuroscience, Department of Applied Physiology and Kinesiology, University of Florida, PO Box 118206, Gainesville, FL, United States.
David E VaillancourtJ. Crayton Pruitt Family Department of Biomedical Engineering, Smart Medical Informatics Learning and Evaluation Lab, College of Engineering, University of Florida, PO Box 116131, Gainesville, FL, United States; Laboratory for Rehabilitation Neuroscience, Department of Applied Physiology and Kinesiology, University of Florida, PO Box 118206, Gainesville, FL, United States.
Ruogu FangJ. Crayton Pruitt Family Department of Biomedical Engineering, Smart Medical Informatics Learning and Evaluation Lab, College of Engineering, University of Florida, PO Box 116131, Gainesville, FL, United States; Center for Cognitive Aging and Memory, McKnight Brain Institute, University of Florida, Gainesville, United States; Department of Electrical and Computer Engineering, University of Florida, Gainesville, FL, United States. Electronic address: ruogu.fang@bme.ufl.edu.
Stephen A CoombesJ. Crayton Pruitt Family Department of Biomedical Engineering, Smart Medical Informatics Learning and Evaluation Lab, College of Engineering, University of Florida, PO Box 116131, Gainesville, FL, United States; Laboratory for Rehabilitation Neuroscience, Department of Applied Physiology and Kinesiology, University of Florida, PO Box 118206, Gainesville, FL, United States. Electronic address: scoombes@ufl.edu.
University of Florida · US

Funding

Using social networks to map and evaluate team science across CTSA hubsUL1TR001427 · NCATS · UNIVERSITY OF FLORIDA · PI MITCHELL, DUANE A. · 2015 to 2024
$37.2M
Scaling and Sequencing Motor Output in Humans: fMRI StudyR01NS052318 · NINDS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI VAILLANCOURT, DAVID E · 2005 to 2020
$6.0M
Together: Transforming and Translating Discovery to Improve HealthTL1TR001428 · NCATS · UNIVERSITY OF FLORIDA · PI MCCORMACK, WAYNE T. · 2015 to 2023
$3.9M
NCATS NIH HHS TL1 TR001428NCATS NIH HHS UL1 TR001427NINDS NIH HHS R01 NS052318
6 · The paper itself

Abstract

In addition to the well-established somatotopy in the pre- and post-central gyrus, there is now strong evidence that somatotopic organization is evident across other regions in the sensorimotor network. This raises several experimental questions: To what extent is activity in the sensorimotor network effector-dependent and effector-independent? How important is the sensorimotor cortex when predicting the motor effector? Is there redundancy in the distributed somatotopically organized network such that removing one region has little impact on classification accuracy? To answer these questions, we developed a novel experimental approach. fMRI data were collected while human subjects performed a precisely controlled force generation task separately with their hand, foot, and mouth. We used a simple linear iterative clustering (SLIC) algorithm to segment whole-brain beta coefficient maps to build an adaptive brain parcellation and then classified effectors using extreme gradient boosting (XGBoost) based on parcellations at various spatial resolutions. This allowed us to understand how data-driven adaptive brain parcellation granularity altered classification accuracy. Results revealed effector-dependent activity in regions of the post-central gyrus, precentral gyrus, and paracentral lobule. SMA, regions of the inferior and superior parietal lobule, and cerebellum each contained effector-dependent and effector-independent representations. Machine learning analyses showed that increasing the spatial resolution of the data-driven model increased classification accuracy, which reached 94% with 1755 supervoxels. Our SLIC-based supervoxel parcellation outperformed classification analyses using established brain templates and random simulations. Occlusion experiments further demonstrated redundancy across the sensorimotor network when classifying effectors. Our observations extend our understanding of effector-dependent and effector-independent organization within the human brain and provide new insight into the functional neuroanatomy required to predict the motor effector used in a motor control task.

Indexed as

Machine LearningMagnetic Resonance ImagingAlgorithmsBrain MappingFemaleHumansImage Processing, Computer-AssistedMaleMovementPsychomotor PerformanceSensorimotor CortexYoung Adult

Identifiers

PMID34780917
PMCPMC9008369
OpenAlexW3211811186

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.