Evidence map›Paper›PMID 34780058›Full record

ArticleFEBS letters2021

SARS-CoV-2 nucleocapsid protein interacts with immunoregulators and stress granules and phase separates to form liquid droplets.

Syam Prakash Somasekharan, Martin Gleave

Open access · hybridAbstract read
In one paragraph

Article in FEBS letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 34 citations in OpenAlex.

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  18. Role of E3 ubiquitin ligases and deubiquitinating enzymes in SARS-CoV-2 infection.Frontiers in cellular and infection microbiology · 2023
    Review
  19. Review
  20. Molecular Variation and Genomic Function of Citrus Vein Enation Virus.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Syam Prakash SomasekharanDepartment of Urologic Sciences, Faculty of Medicine, Vancouver Prostate Centre, University of British Columbia, Vancouver, BC, Canada.ORCID 0000-0002-9006-8206
Martin GleaveDepartment of Urologic Sciences, Faculty of Medicine, Vancouver Prostate Centre, University of British Columbia, Vancouver, BC, Canada.
University of British Columbia · CA

Funding

Terry Fox Research Institute
6 · The paper itself

Abstract

The current work investigated SARS-CoV-2 Nucleocapsid (NCAP or N protein) interactors in A549 human lung cancer cells using a SILAC-based mass spectrometry approach. NCAP interactors included proteins of the stress granule (SG) machinery and immunoregulators. NCAP showed specific interaction with the SG proteins G3BP1, G3BP2, YTHDF3, USP10 and PKR, and translocated to SGs following oxidative stress and heat shock. Treatment of recombinant NCAP with RNA isolated from A549 cells exposed to oxidative stress-stimulated NCAP to undergo liquid-liquid phase separation (LLPS). RNA degradation using RNase A treatment completely blocked the LLPS property of NCAP as well as its SG association. The RNA intercalator mitoxantrone also disrupted NCAP assembly in vitro and in cells. This study provides insight into the biological processes and biophysical properties of the SARS-CoV-2 NCAP.

Indexed as

A549 CellsAdaptor Proteins, Signal TransducingCoronavirus Nucleocapsid ProteinsDNA HelicaseseIF-2 KinaseHumansPhosphoproteinsPoly-ADP-Ribose Binding ProteinsProtein BindingRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsStress GranulesUbiquitin ThiolesteraseAdaptor Proteins, Signal TransducingCoronavirus Nucleocapsid ProteinsDNA HelicasesEIF2AK2 protein, humaneIF-2 KinaseG3BP1 protein, humanG3BP2 protein, humannucleocapsid phosphoprotein, SARS-CoV-2PhosphoproteinsPoly-ADP-Ribose Binding ProteinsRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsUbiquitin ThiolesteraseUSP10 protein, humanYTHDF3 protein, humanG3BP1liquid-liquid phase separationmitoxantroneNCAPnucleocapsidSARS-CoV-2SILACstress granulesviral factoryviral infection

Identifiers

PMID34780058
PMCPMC8652540
OpenAlexW3212483788

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.