Evidence map›Paper›PMID 34773930›Full record

ArticleIranian biomedical journal2022

TLR2 and TLR4 Signaling Pathways and Gastric Cancer: Insights from Transcriptomics and Sample Validation

Saeed Zargari, Abbas Bahari, Mohammad Taghi Goodarzi, Minoo Mahmoodi, Reza Valadan

Open access · greenAbstract read
In one paragraph

Article in Iranian biomedical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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  6. In Peripheral Blood Mononuclear CellsInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Saeed ZargariDepartment of Biology, Hamedan Branch, Islamic Azad University, Hamedan, Iran.
Abbas BahariResearch Institute of Modern Biological Techniques, University of Zanjan, Zanjan, Iran.
Mohammad Taghi GoodarziDepartment of Biochemistry, Shahrood Branch, Islamic Azad University, Shahrood, Iran.
Minoo MahmoodiDepartment of Biology, Hamedan Branch, Islamic Azad University, Hamedan, Iran.
Reza ValadanDepartment of Immunology, Molecular and Cell Biology Research Center, School of Medicine, Mazandaran University of Medical science, Mazandaran, Iran.
Islamic Azad University of Hamedan · IRIslamic Azad University, Shahrood · IRUniversity of Zanjan · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Pattern recognition receptors, especially toll-like receptors (TLRs), as the first line of defense for pathogen detection, were found to be associated with H.¬ pylori infection and gastric cancer (GC). However, the expression levels of TLRs, i.e. TLR2 and TLR4, as the main receptors sensed by H.¬ pylori, still remain largely ambiguous. We aimed to investigate the patterns of key transcripts of TLR2 and TLR4 in 100 GC transcriptome data. Additionally, we evaluated TLR2 and TLR4 gene expressions in gastric biopsies of Iranian GC patients, in order to validate RNA-seq outputs. Methods: For this study, 100 runs of GC samples and controls were processed and analyzed using map read to reference. Differential gene expression method was used to distinguish between GC and normal samples in the expression of TLRs and other innate immune molecules. Also, using qRT-PCR assay, transcripts of TLRs molecules for 15 GC and 15 control samples were analyzed based on the analysis of variance and least significant differences. Results: The results clearly showed that all signaling pathways molecules of TLR4, especially TLR4 (p = 0.019), NF-κB (p ¬= 0.047), IL-1β (p = 0.0096), and TNF-α (p = 0.048), were upregulated in a cancerous condition in different parts and at various stages of GC. Conclusion: Our findings suggested that molecules involved in inflammation, including TLR4 and its related pro-inflammatory cytokines, may be responsible for the development and progression of GC. Accordingly, the control of H. pylori infection reduces inflammation in the gastric system and can play an important role in preventing gastrointestinal disorders.

Indexed as

Signal TransductionAgedFemaleHumansMaleMiddle AgedStomach NeoplasmsToll-Like Receptor 2Toll-Like Receptor 4TranscriptomeTLR2 protein, humanTLR4 protein, humanToll-Like Receptor 2Toll-Like Receptor 4Gastric cancerGene expressionInflammationPattern recognition receptorsRNA-seq

Identifiers

PMID34773930
PMCPMC8784901
OpenAlexW3211480972

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.