Evidence map›Paper›PMID 34771686›Full record

ArticleCancers2021

Gene Expression Signature Associated with Clinical Outcome in ALK-Positive Anaplastic Large Cell Lymphoma.

Camille Daugrois, Chloé Bessiere, Sébastien Dejean, Véronique Anton-Leberre, Thérèse Commes, Stephane Pyronnet, Pierre Brousset, Estelle Espinos, Laurence Brugiere, Fabienne Meggetto and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Camille DaugroisInserm, UMR1037 CRCT, F-31000 Toulouse, France.
Chloé BessiereInstitut de Médecine Régénératrice et de Biothérapie, Inserm U1183, CHU Montpellier, F-34295 Montpellier, France.
Sébastien DejeanInstitut de Mathématiques de Toulouse, UMR 5219 CNRS, Université Toulouse III-Paul Sabatier, F-31062 Toulouse, France.
Véronique Anton-LeberreLaboratoire d'Ingénierie des Systèmes Biologiques et des Procédés (LISBP), UMR INSA/CNRS 5504/INRA 792, INSA Batiment Bio 5, 135, Avenue de Rangueil, CEDEX 4, F-31077 Toulouse, France.
Thérèse CommesInstitut de Médecine Régénératrice et de Biothérapie, Inserm U1183, CHU Montpellier, F-34295 Montpellier, France.
Stephane PyronnetInserm, UMR1037 CRCT, F-31000 Toulouse, France.ORCID 0000-0002-9562-5112
Pierre BroussetInserm, UMR1037 CRCT, F-31000 Toulouse, France.ORCID 0000-0002-8629-3291
Estelle EspinosInserm, UMR1037 CRCT, F-31000 Toulouse, France.
Laurence BrugiereDepartment of Pediatric Oncology, Institut Gustave-Roussy, F-94805 Villejuif, France.
Fabienne MeggettoInserm, UMR1037 CRCT, F-31000 Toulouse, France.ORCID 0000-0002-2610-0144
Laurence LamantInserm, UMR1037 CRCT, F-31000 Toulouse, France.
Centre National de la Recherche Scientifique · FRInserm · FRInstitut Gustave Roussy · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anaplastic large cell lymphomas associated with ALK translocation have a good outcome after CHOP treatment; however, the 2-year relapse rate remains at 30%. Microarray gene-expression profiling of 48 samples obtained at diagnosis was used to identify 47 genes that were differentially expressed between patients with early relapse/progression and no relapse. In the relapsing group, the most significant overrepresented genes were related to the regulation of the immune response and T-cell activation while those in the non-relapsing group were involved in the extracellular matrix. Fluidigm technology gave concordant results for 29 genes, of which FN1, FAM179A, and SLC40A1 had the strongest predictive power after logistic regression and two classification algorithms. In parallel with 39 samples, we used a Kallisto/Sleuth pipeline to analyze RNA sequencing data and identified 20 genes common to the 28 genes validated by Fluidigm technology-notably, the

Indexed as

ALK+ ALCLclinical outcomepredictive signaturerelapse

Identifiers

PMID34771686
PMCPMC8582782
OpenAlexW3208001966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.