Evidence map›Paper›PMID 34769491›Full record

ArticleInternational journal of molecular sciences2021

A UHPLC-Mass Spectrometry View of Human Melanocytic Cells Uncovers Potential Lipid Biomarkers of Melanoma.

Arantza Perez-Valle, Beatriz Abad-García, Olatz Fresnedo, Gabriel Barreda-Gómez, Patricia Aspichueta, Aintzane Asumendi, Egoitz Astigarraga, José A Fernández, María Dolores Boyano, Begoña Ochoa

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Decoding the Role of Lipid Metabolism and Membrane Dynamics in Melanoma.International journal of molecular sciences · 2026
    Review
  4. Review
  5. Emerging Roles of Ferroptosis in Skin Pathophysiology.The Journal of investigative dermatology · 2025
    Review
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Arantza Perez-ValleDepartment of Cell Biology and Histology, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0002-3108-4978
Beatriz Abad-GarcíaCentral Analysis Service, Faculty of Science and Technology, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0001-6945-5730
Olatz FresnedoDepartment of Physiology, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0002-1172-1423
Gabriel Barreda-GómezIMG Pharma Biotech S.L., Bizkaia Technological Park, 48160 Derio, Spain.ORCID 0000-0002-8330-1567
Patricia AspichuetaDepartment of Physiology, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0002-3553-1755
Aintzane AsumendiDepartment of Cell Biology and Histology, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0002-2156-2323
Egoitz AstigarragaIMG Pharma Biotech S.L., Bizkaia Technological Park, 48160 Derio, Spain.
José A FernándezDepartment of Physical Chemistry, Faculty of Science and Technology, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.
María Dolores BoyanoDepartment of Cell Biology and Histology, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0001-6051-1054
Begoña OchoaDepartment of Physiology, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, 48940 Leioa, Spain.ORCID 0000-0002-1580-7160
University of the Basque Country · ES

Funding

Basque Government IT971-16, IT1162-19, KK2016-036, KK2017-041 and KK2018-00090Ministry of Economy, Industry and Competitiveness RTC-2015-3693-1Ministry of Science and Innovation RTI-2018-095134-B-100RTC-2015-3693-1 Ministry of Economy, Industry and CompetitivenessUniversity of the Basque Country GIU17/066
6 · The paper itself

Abstract

Melanoma is the deadliest form of skin cancer due to its ability to colonize distant sites and initiate metastasis. Although these processes largely depend on the lipid-based cell membrane scaffold, our understanding of the melanoma lipid phenotype lags behind most other aspects of this tumor cell. Here, we examined a panel of normal human epidermal and nevus melanocytes and primary and metastatic melanoma cell lines to determine whether distinctive cell-intrinsic lipidomes can discern non-neoplastic from neoplastic melanocytes and define their metastatic potential. Lipidome profiles were obtained by UHPLC-ESI mass-spectrometry, and differences in the signatures were analyzed by multivariate statistical analyses. Significant and highly specific changes in more than 30 lipid species were annotated in the initiation of melanoma, whereas less numerous changes were associated with melanoma progression and the non-malignant transformation of nevus melanocytes. Notably, the "malignancy lipid signature" features marked drops in pivotal membrane lipids, like sphingomyelins, and aberrant elevation of ether-type lipids and phosphatidylglycerol and phosphatidylinositol variants, suggesting a previously undefined remodeling of sphingolipid and glycerophospholipid metabolism. Besides broadening the molecular definition of this neoplasm, the different lipid profiles identified may help improve the clinical diagnosis/prognosis and facilitate therapeutic interventions for cutaneous melanoma.

Indexed as

Metabolic Networks and PathwaysBiomarkers, TumorCell LineCell Line, TumorChromatography, High Pressure LiquidComputational BiologyCutaneous Malignant MelanomaHumansLipid MetabolismLipidomicsLipidsMass SpectrometryMelanocytesMelanomaSkin NeoplasmsBiomarkers, TumorLipidsether lipidhumanlipid biomarkerlipid phenotypemelanocytemelanomametastasisnevus melanocyteplasmalogensphingomyelin

Identifiers

PMID34769491
PMCPMC8585039
OpenAlexW3213964356

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.