Evidence map›Paper›PMID 34769410›Full record

ArticleInternational journal of molecular sciences2021

Photoactivation of Cell-Free Expressed Archaerhodopsin-3 in a Model Cell Membrane.

Navid Khangholi, Marc Finkler, Ralf Seemann, Albrecht Ott, Jean-Baptiste Fleury

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Membrane Proteins: Structure, Function and Motion.International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Navid KhangholiExperimental Physics and Center for Biophysics, Saarland University, 66123 Saarbrücken, Germany.
Marc FinklerExperimental Physics and Center for Biophysics, Saarland University, 66123 Saarbrücken, Germany.ORCID 0000-0002-8986-0378
Ralf SeemannExperimental Physics and Center for Biophysics, Saarland University, 66123 Saarbrücken, Germany.
Albrecht OttExperimental Physics and Center for Biophysics, Saarland University, 66123 Saarbrücken, Germany.ORCID 0000-0003-0481-2658
Jean-Baptiste FleuryExperimental Physics and Center for Biophysics, Saarland University, 66123 Saarbrücken, Germany.
Saarland University · DE

Funding

Deutsche Forschungsgemeinschaft CRC 1027
6 · The paper itself

Abstract

Transmembrane receptor proteins are located in the plasma membranes of biological cells where they exert important functions. Archaerhodopsin (Arch) proteins belong to a class of transmembrane receptor proteins called photoreceptors that react to light. Although the light sensitivity of proteins has been intensely investigated in recent decades, the electrophysiological properties of pore-forming Archaerhodopsin (Arch), as studied in vitro, have remained largely unknown. Here, we formed unsupported bilayers between two channels of a microfluidic chip which enabled the simultaneous optical and electrical assessment of the bilayer in real time. Using a cell-free expression system, we recombinantly produced a GFP (green fluorescent protein) labelled as a variant of Arch-3. The label enabled us to follow the synthesis of Arch-3 and its incorporation into the bilayer by fluorescence microscopy when excited by blue light. Applying a green laser for excitation, we studied the electrophysiological properties of Arch-3 in the bilayer. The current signal obtained during excitation revealed distinct steps upwards and downwards, which we interpreted as the opening or closing of Arch-3 pores. From these steps, we estimated the pore radius to be 0.3 nm. In the cell-free extract, proteins can be modified simply by changing the DNA. In the future, this will enable us to study the photoelectrical properties of modified transmembrane protein constructs with ease. Our work, thus, represents a first step in studying signaling cascades in conjunction with coupled receptor proteins.

Indexed as

Cell-Free SystemElectrophysiological PhenomenaLightLipid BilayersMembrane ProteinsMicrofluidicsMicroscopy, FluorescencePhotoreceptors, MicrobialRhodopsins, MicrobialLipid BilayersMembrane ProteinsPhotoreceptors, MicrobialRhodopsins, MicrobialArchaerhodopsin-3cell-free gene expressionlipid bilayermicrofluidics

Identifiers

PMID34769410
PMCPMC8584582
OpenAlexW3213877733

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.