Evidence map›Paper›PMID 34768133›Full record

ArticleJournal of the neurological sciences2021

DNA methylation-based surrogates of plasma proteins are associated with Parkinson's disease risk.

Katherine A Fu, Kimberly C Paul, Ake T Lu, Steve Horvath, Adrienne M Keener, Yvette Bordelon, Jeff M Bronstein, Beate Ritz

Open access · greenAbstract read
In one paragraph

Article in Journal of the neurological sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Katherine A FuDepartment of Neurology, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA. Electronic address: kfu@mednet.ucla.edu.
Kimberly C PaulDepartment of Epidemiology, UCLA Fielding School of Public Health, Los Angeles, CA 90095, USA.
Ake T LuDepartment of Human Genetics, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA.
Steve HorvathDepartment of Human Genetics, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA; Department of Biostatistics, UCLA Fielding School of Public Health, University of California Los Angeles, Los Angeles, CA 90095, USA.
Adrienne M KeenerDepartment of Neurology, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA; Department of Neurology, Veterans Administration Greater Los Angeles Healthcare System, Los Angeles, CA 90073, USA.
Yvette BordelonDepartment of Neurology, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA.
Jeff M BronsteinDepartment of Neurology, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA.
Beate RitzDepartment of Neurology, UCLA David Geffen School of Medicine, Los Angeles, CA 90095, USA; Department of Epidemiology, UCLA Fielding School of Public Health, Los Angeles, CA 90095, USA. Electronic address: britz@ucla.edu.
University of California, Los Angeles · USUCLA Health · USVA Greater Los Angeles Healthcare System · US

Funding

PARKINSON'S DISEASES SUSCEPTIBILITY GENES AND PESTICIDESR01ES010544 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RITZ, BEATE R. · 2000 to 2015
$5.7M
Microbiome, Pesticides and Parkinsons in LatinosR01ES031106 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RITZ, BEATE R. · 2020 to 2025
$3.8M
Immune System Aging in Parkinson’s and Alzheimer’s disease: Epigenetics, biologic aging, and heightened immune states in a population-based studyK01AG072044 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PAUL, KIMBERLY · 2021 to 2025
$717k
Environment, Metabolomics, and PDR21ES030175 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RITZ, BEATE R. · 2019 to 2020
$443k
Environmental exposure, DNA methylation, and Parkinson's diseaseR21ES024356 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HORVATH, STEVE, RITZ, BEATE R. · 2014 to 2015
$424k
Environmental Predictors of the Overlap of Neurodegenerative Disorders and Metabolic DysfunctionF32ES028087 · NIEHS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PAUL, KIMBERLY · 2017 to 2018
$121k
NIA NIH HHS K01 AG072044NIEHS NIH HHS F32 ES028087NIEHS NIH HHS R01 ES010544NIEHS NIH HHS R01 ES031106NIEHS NIH HHS R21 ES024356NIEHS NIH HHS R21 ES030175
6 · The paper itself

Abstract

backgroundThe epigenome may reflect Parkinson's disease (PD) risk, which serves as a point of convergence of genetic and environmental risk factors. Here, we investigate whether blood DNA methylation (DNAm) markers are associated with PD risk.

methodsWe selected 12 plasma proteins known as predictors of cardiovascular conditions and mortality to evaluate their effects on PD risk in a case-control study. In lieu of protein level measures, however, we assessed the influence of their DNAm surrogates. Primary analysis was restricted to 569 PD patients and 238 controls with DNAm data available. Using univariate logistic regression, we evaluated associations between the DNAm markers and PD.

resultsOf the 12 DNAm surrogates, the most robustly associated were DNAm EFEMP-1 and DNAm CD56, which were associated with PD with and without controlling for blood cell composition. DNAm EFEMP-1 was associated with a decreased risk of PD (OR = 0.83 per SD, 95% CI = 0.70, 0.98) whereas DNAm CD56 was associated with an increased risk of PD (OR = 1.41, 95% CI = 1.11, 1.79).

conclusionsSeveral DNAm markers, selected as part of a panel to track cardiovascular outcomes and mortality, were associated with PD risk. DNAm markers may inform of factors that are affected differentially in early PD patients compared with controls.

Indexed as

DNA MethylationParkinson DiseaseBlood ProteinsCase-Control StudiesDisease SusceptibilityEpigenesis, GeneticHumansBlood ProteinsCardiovascular diseaseDisease riskDNA methylationEpigeneticsParkinson's disease

Identifiers

PMID34768133
PMCPMC8769489
OpenAlexW3209008356

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.