Evidence map›Paper›PMID 34767620›Full record

ArticleBlood2022

Gain-of-function mutations in RPA1 cause a syndrome with short telomeres and somatic genetic rescue.

Richa Sharma, Sushree S Sahoo, Masayoshi Honda, Sophie L Granger, Charnise Goodings, Louis Sanchez, Axel Künstner, Hauke Busch, Fabian Beier, Shondra M Pruett-Miller and 23 more

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in Blood, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02450851 (Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network), which is not on this map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02450851 recruitingnot on this map

Clinical and Genetic Evaluation of Patients With Undiagnosed Disorders Through the Undiagnosed Diseases Network

TypeobservationalSponsorNational Human Genome Research Institute (NHGRI)Ran2015 to 2028Enrolled20,000ConditionsGenetic Disease
3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Review
  3. Fission yeast RPA-TERT-Tpz1bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Clonal Signatures of Telomere Biology Disorders.Current hematologic malignancy reports · 2026
    Review
  7. Disrupted lipid homeostasis as a pathogenic mechanism in ABCA7-associated Alzheimer's disease risk.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
  8. Review
  9. Article
  10. Genetic Familial Interstitial Lung Disease.Clinics in chest medicine · 2025
    Review
  11. Article
  12. Article
  13. Review
  14. The canonical RPA complex interacts with Est3 to regulate yeast telomerase activity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Review
  17. Article
  18. Inherited Telomere Biology Disorders: Pathophysiology, Clinical Presentation, Diagnostics, and Treatment.Transfusion medicine and hemotherapy : offizielles Organ der Deutschen Gesellschaft fur Transfusionsmedizin und Immunhamatologie · 2024
    Review
  19. HeterozygousGenes & development · 2024
    Article
  20. Survival-Related Genes on Chromosomes 6 and 17 in Medulloblastoma.International journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors at 11 institutions in 5 countries.

Richa SharmaDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN.
Sushree S SahooDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN.
Masayoshi HondaDepartment of Biochemistry and Molecular Biology, Carver College of Medicine, University of Iowa, Iowa City, IA.ORCID 0000-0001-8920-6301
Sophie L GrangerDepartment of Biochemistry and Molecular Biology, Carver College of Medicine, University of Iowa, Iowa City, IA.
Charnise GoodingsDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-8189-0989
Louis SanchezStructure et Instabilité des Génomes, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique (CNRS) Unité Mixte de Recherche (UMR) 7196, INSERM Unité1154, Paris, France.
Axel KünstnerLübeck Institute of Experimental Dermatology and Institute of Cardiogenetics, University of Lübeck, Lübeck, Germany.ORCID 0000-0003-0692-2105
Hauke BuschLübeck Institute of Experimental Dermatology and Institute of Cardiogenetics, University of Lübeck, Lübeck, Germany.ORCID 0000-0003-4763-4521
Fabian BeierDepartment of Hematology, Oncology, Hemostaseology and Stem Cell Transplantation, Medical Faculty, RWTH Aachen University, Aachen, Germany.
Shondra M Pruett-MillerDepartment of Cell and Molecular Biology.ORCID 0000-0002-3793-585X
Marcus B ValentineCytogenetics Core Facility, and.
Alfonso G FernandezDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN.
Ti-Cheng ChangCenter for Applied Bioinformatics, St Jude Children's Research Hospital, Memphis, TN.
Vincent GéliMarseille Cancer Research Centre, Unité1068 INSERM, UMR 7258 CNRS, Aix-Marseille University (UM 105), Institut Paoli-Calmettes, Equipe Labellisée par la Ligue Nationale contre le Cancer, Marseille, France.ORCID 0000-0002-4103-7462
Dmitri ChurikovMarseille Cancer Research Centre, Unité1068 INSERM, UMR 7258 CNRS, Aix-Marseille University (UM 105), Institut Paoli-Calmettes, Equipe Labellisée par la Ligue Nationale contre le Cancer, Marseille, France.ORCID 0000-0003-1127-8852
Sandrine HirschiDepartment of Respiratory Medicine and Rare Pulmonary Diseases, Strasbourg University Hospital, Strasbourg, France.
Victor B PastorCenter for Applied Bioinformatics, St Jude Children's Research Hospital, Memphis, TN.
Melanie BoerriesInstitute of Medical Bioinformatics and Systems Medicine, Medical Center-University of Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany.ORCID 0000-0002-3670-0602
Melchior LautenUniversity Hospital Schleswig-Holstein, Department of Pediatrics, University of Lübeck, Lübeck, Germany.ORCID 0000-0003-4774-0279
Charikleia KelaidiDepartment of Pediatric Hematology/Oncology, Aghia Sophia Children's Hospital, Athens, Greece.
Megan A CooperDepartment of Pediatrics, Washington University School of Medicine, St Louis, MO.ORCID 0000-0002-5696-172X
Sarah NicholasDepartment of Allergy and Immunology and.
Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.ORCID 0000-0001-5664-7987
Sophia PolychronopoulouDepartment of Pediatric Hematology/Oncology, Aghia Sophia Children's Hospital, Athens, Greece.ORCID 0000-0001-9716-9264
Caroline KannengiesserDepartment of Genetics, Bichat Hospital, Assistance Publique-Hôpitaux de Paris, Paris University, INSERM U1152, Paris, France.
Carole SaintoméStructure et Instabilité des Génomes, Muséum National d'Histoire Naturelle, Centre National de la Recherche Scientifique (CNRS) Unité Mixte de Recherche (UMR) 7196, INSERM Unité1154, Paris, France.ORCID 0000-0002-7609-6913
Charlotte M NiemeyerGerman Cancer Consortium (DKTK), Freiburg, Germany, and German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0003-3856-7937
Patrick RevyUniversité de Paris, Imagine Institute, Laboratory of Genome Dynamics in the Immune System, Laboratoire Labellisé Ligue, INSERM UMR 1163, Paris, France.ORCID 0000-0003-0758-8022
Marc S WoldDepartment of Biochemistry and Molecular Biology, Carver College of Medicine, University of Iowa, Iowa City, IA.
Maria SpiesDepartment of Biochemistry and Molecular Biology, Carver College of Medicine, University of Iowa, Iowa City, IA.ORCID 0000-0002-7375-8037
Miriam ErlacherGerman Cancer Consortium (DKTK), Freiburg, Germany, and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Stéphane CoulonMarseille Cancer Research Centre, Unité1068 INSERM, UMR 7258 CNRS, Aix-Marseille University (UM 105), Institut Paoli-Calmettes, Equipe Labellisée par la Ligue Nationale contre le Cancer, Marseille, France.ORCID 0000-0001-8090-914X
Marcin W WlodarskiDepartment of Hematology, St Jude Children's Research Hospital, Memphis, TN.ORCID 0000-0001-6638-9643
St. Jude Children's Research Hospital · USCentre National de la Recherche Scientifique · FRUniversity of Iowa · USUniversity Hospital Schleswig-Holstein · DEUniversity of Freiburg · DEChildren's Hospital Agia Sophia · GRInserm · FRBaylor College of Medicine · USRWTH Aachen University · DEUniversité de Strasbourg · FRWashington University in St. Louis · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Christopher K Laubenthal · 2000 to 2026
$70.0M
Pilot of New Technologies to Increase the Genomic Diagnosis of Undiagnosed Disease Network (UDN) PatientsU01HG007709 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI BACINO, CARLOS A., LEE, BRENDAN · 2014 to 2022
$14.3M
Assembly and Dynamics of Molecular Machines in Genome MaintenanceR35GM131704 · NIGMS · UNIVERSITY OF IOWA · PI Maria Spies · 2019 to 2026
$3.9M
NCI NIH HHS P30 CA021765NCI NIH HHS P30 CA086862NHGRI NIH HHS U01 HG007709NIGMS NIH HHS R35 GM131704
6 · The paper itself

Abstract

Human telomere biology disorders (TBD)/short telomere syndromes (STS) are heterogeneous disorders caused by inherited loss-of-function mutations in telomere-associated genes. Here, we identify 3 germline heterozygous missense variants in the RPA1 gene in 4 unrelated probands presenting with short telomeres and varying clinical features of TBD/STS, including bone marrow failure, myelodysplastic syndrome, T- and B-cell lymphopenia, pulmonary fibrosis, or skin manifestations. All variants cluster to DNA-binding domain A of RPA1 protein. RPA1 is a single-strand DNA-binding protein required for DNA replication and repair and involved in telomere maintenance. We showed that RPA1E240K and RPA1V227A proteins exhibit increased binding to single-strand and telomeric DNA, implying a gain in DNA-binding function, whereas RPA1T270A has binding properties similar to wild-type protein. To study the mutational effect in a cellular system, CRISPR/Cas9 was used to knock-in the RPA1E240K mutation into healthy inducible pluripotent stem cells. This resulted in severe telomere shortening and impaired hematopoietic differentiation. Furthermore, in patients with RPA1E240K, we discovered somatic genetic rescue in hematopoietic cells due to an acquired truncating cis RPA1 mutation or a uniparental isodisomy 17p with loss of mutant allele, coinciding with stabilized blood counts. Using single-cell sequencing, the 2 somatic genetic rescue events were proven to be independently acquired in hematopoietic stem cells. In summary, we describe the first human disease caused by germline RPA1 variants in individuals with TBD/STS.

Indexed as

Gain of Function MutationHeterozygoteTelomere ShorteningAdolescentAdultBone Marrow Failure DisordersCell DifferentiationChildFemaleHumansInfant, NewbornMaleMiddle AgedMyelodysplastic SyndromesReplication Protein ATelomereReplication Protein ARPA1 protein, human

Identifiers

PMID34767620
PMCPMC8854676
OpenAlexW3211490121

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.