Evidence map›Paper›PMID 34766968›Full record

ArticleThe Journal of general physiology2022

A flexible GAS belt responds to pore mutations changing the ion selectivity of proton-gated channels.

Zhuyuan Chen, Sheng Lin, Tianze Xie, Jin-Ming Lin, Cecilia M Canessa

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Article in The Journal of general physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  3. Epithelial NaComprehensive Physiology · 2024
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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Zhuyuan ChenDepartment of Basic Sciences, Tsinghua University School of Medicine, Beijing, China.ORCID 0000-0002-0008-1707
Sheng LinDepartment of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, Ministry of Education Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, China.
Tianze XieDepartment of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, Ministry of Education Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, China.
Jin-Ming LinDepartment of Chemistry, Beijing Key Laboratory of Microanalytical Methods and Instrumentation, Ministry of Education Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Tsinghua University, Beijing, China.
Cecilia M CanessaDepartment of Basic Sciences, Tsinghua University School of Medicine, Beijing, China.ORCID 0000-0001-7316-5082

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proton-gated ion channels conduct mainly Na+ to induce postsynaptic membrane depolarization. Finding the determinants of ion selectivity requires knowledge of the pore structure in the open conformation, but such information is not yet available. Here, the open conformation of the hASIC1a channel was computationally modeled, and functional effects of pore mutations were analyzed in light of the predicted structures. The open pore structure shows two constrictions of similar diameter formed by the backbone of the GAS belt and, right beneath it, by the side chains of H28 from the reentrant loop. Models of nonselective mutant channels, but not those that maintain ion selectivity, predict enlargement of the GAS belt, suggesting that this motif is quite flexible and that the loss of stabilizing interactions in the central pore leads to changes in size/shape of the belt. Our results are consistent with the "close-fit" mechanism governing selectivity of hASIC1a, wherein the backbone of the GAS substitutes at least part of the hydration shell of a permeant ion to enable crossing the pore constriction.

Indexed as

Ion ChannelsProtonsIonsMutationSodiumIon ChannelsIonsProtonsSodium

Identifiers

PMID34766968
PMCPMC8594623

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.