ArticleGenome research2022
Long-read assembly and comparative evidence-based reanalysis of
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Article in Genome research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.
0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
46 citing papers in PubMed, 58 citations in OpenAlex.
- Genome-targeted enrichment and sequencing of human-infecting Cryptosporidium spp.Nature communications · 2026Article
- Article
- A comprehensive proteome and the first phosphoproteome reveal extensive phosphorylation of carbohydrate metabolism in Cryptosporidium parvum sporozoites.Parasites & vectors · 2026Article
- The genome sequence of the gastric gland parasite,iScience · 2026Article
- Advancing genomics for waterborne pathogen surveillance in Australia.The Lancet regional health. Western Pacific · 2026Review
- Insights into the lifecycle of Cryptosporidium and compounds targeting developmental stages.Current opinion in microbiology · 2026Review
- Optimized Genome Assembly Protocol for Cryptosporidium.Methods in molecular biology (Clifton, N.J.) · 2026Article
- Whole genome sequencing of Cryptosporidium from low DNA inputs without whole genome amplification.Molecular biology reports · 2025Article
- Cryptosporidium parvum multidrug resistance protein confers resistance to toxic gut microbial metabolite.Cell host & microbe · 2025Article
- New T2T assembly of Cryptosporidium parvum IOWA II annotated with Legacy-Compatible Gene identifiers.Scientific data · 2025Article
- SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing.Nature communications · 2025Article
- Dissecting Metabolic Functions and Sugar Transporters Using Genome and Transportome of ProbioticGenes · 2025Article
- Deciphering Transcription inbioRxiv : the preprint server for biology · 2025Article
- Stage-specific expression and divergent functions of two insulinase-like proteases associated with host infectivity in Cryptosporidium.PLoS neglected tropical diseases · 2025Article
- Impact of predicted microbiota tryptophanase activity on Cryptosporidium parvum proliferation.PloS one · 2025Article
- Parapipe: a pipeline for parasite next-generation sequencing data analysis applied to Cryptosporidium.Access microbiology · 2025Article
- Gene regulation inCurrent research in parasitology & vector-borne diseases · 2025Article
- Multicopy subtelomeric genes underlie animal infectivity of divergent Cryptosporidium hominis subtypes.Nature communications · 2024Article
- A new chromosome-level genome assembly and annotation of Cryptosporidium meleagridis.Scientific data · 2024Article
- Chromosome-level genome assembly of Cryptosporidium parvum by long-read sequencing of ten oocysts.Scientific data · 2024Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
18 authors at 5 institutions in 3 countries.
Rodrigo P BaptistaCenter for Tropical and Emerging Global Diseases, University of Georgia, Athens, Georgia 30602, USA.ORCID 0000-0002-1806-8260
Yiran LiInstitute of Bioinformatics, University of Georgia, Athens, Georgia 30602, USA.ORCID 0000-0002-6339-5324
Adam SaterialeDepartment of Pathology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.ORCID 0000-0001-8947-2714
Mandy J SandersThe Wellcome Sanger Institute, Hinxton, CB10 1SA, United Kingdom.
Karen L BrooksThe Wellcome Sanger Institute, Hinxton, CB10 1SA, United Kingdom.
Alan TraceyThe Wellcome Sanger Institute, Hinxton, CB10 1SA, United Kingdom.ORCID 0000-0002-4805-9058
Brendan R E AnsellFaculty of Veterinary and Agricultural Sciences, The University of Melbourne and Population Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Parkville 3052, Australia.ORCID 0000-0003-0297-897X
Aaron R JexFaculty of Veterinary and Agricultural Sciences, The University of Melbourne and Population Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Parkville 3052, Australia.ORCID 0000-0002-1285-7947
Garrett W CooperDepartment of Clinical Pathology, The University of Melbourne, Victorian Comprehensive Cancer Centre, Melbourne VIC 3000, Australia.
Ethan D SmithDepartment of Clinical Pathology, The University of Melbourne, Victorian Comprehensive Cancer Centre, Melbourne VIC 3000, Australia.
Rui XiaoInstitute of Bioinformatics, University of Georgia, Athens, Georgia 30602, USA.ORCID 0000-0003-4178-3497
Jennifer E DumaineDepartment of Pathology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.ORCID 0000-0002-5975-4523
Peter GeorgesonDepartment of Clinical Pathology, The University of Melbourne, Victorian Comprehensive Cancer Centre, Melbourne VIC 3000, Australia.ORCID 0000-0002-5096-4735
Bernard J PopeDepartment of Clinical Pathology, The University of Melbourne, Victorian Comprehensive Cancer Centre, Melbourne VIC 3000, Australia.ORCID 0000-0002-4840-1095
Matthew BerrimanThe Wellcome Sanger Institute, Hinxton, CB10 1SA, United Kingdom.ORCID 0000-0002-9581-0377
Boris StriepenDepartment of Pathology, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.ORCID 0000-0002-7426-432X
James A CottonThe Wellcome Sanger Institute, Hinxton, CB10 1SA, United Kingdom.ORCID 0000-0001-5475-3583
Jessica C KissingerCenter for Tropical and Emerging Global Diseases, University of Georgia, Athens, Georgia 30602, USA.ORCID 0000-0002-6413-1101
The University of Melbourne · AUWellcome Sanger Institute · GBUniversity of Georgia · USUniversity of Pennsylvania · USThe Royal Melbourne Hospital · AU
Funding
PARASITOLOGY: MODERN APPROACHEST32AI007532 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HERBERT, DE'BROSKI R · 1998 to 2022
$5.0MGenetic Analysis of CryptosporidiumR01AI112427 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI STRIEPEN, BORIS · 2014 to 2023
$4.2MSexual Development of CryptosporidiumR01AI127798 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI STRIEPEN, BORIS · 2017 to 2025
$4.1MGenetic Analysis of CryptosporidiumR37AI112427 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI BORIS STRIEPEN · 2024 to 2026
$1.5MInvestigation of subtelomeric gene families in CryptosporidiumK99AI137442 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SATERIALE, ADAM · 2018 to 2019
$216kMedical Research Council APP1194330NIAID NIH HHS K99 AI137442NIAID NIH HHS R01 AI112427NIAID NIH HHS R01 AI127798NIAID NIH HHS R37 AI112427NIAID NIH HHS T32 AI007532Wellcome Trust
Abstract
Cryptosporidiosis is a leading cause of waterborne diarrheal disease globally and an important contributor to mortality in infants and the immunosuppressed. Despite its importance, the
Indexed as
CryptosporidiosisCryptosporidiumDNA Copy Number VariationsGenomeHumansTelomere
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Read underepoch 390
Registered trials
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.