Evidence map›Paper›PMID 34762174›Full record

ArticlePlanta2021

Regulation of dhurrin pathway gene expression during Sorghum bicolor development.

Roslyn M Gleadow, Brian A McKinley, Cecilia K Blomstedt, Austin C Lamb, Birger Lindberg Møller, John E Mullet

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  8. Review
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  10. The Putative GATA Transcription FactorLife (Basel, Switzerland) · 2024
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  12. Cyanogenesis in theGenes · 2022
    Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Roslyn M GleadowSchool of Biological Sciences, Monash University, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0003-4756-0411
Brian A McKinleyDepartment of Plant Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.ORCID http://orcid.org/0000-0001-7105-9649
Cecilia K BlomstedtSchool of Biological Sciences, Monash University, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0003-1919-6982
Austin C LambDepartment of Plant Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.ORCID http://orcid.org/0000-0003-0083-637X
Birger Lindberg MøllerPlant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-3252-3119
John E MulletDepartment of Plant Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA. jmullet@tamu.edu.ORCID http://orcid.org/0000-0003-2502-2671
Texas A&M University · USMonash University · AUUniversity of Copenhagen · DK

Funding

australian research council DP180101011doe great lakes bioenergy research center DE-SC0018409novo nordisk foundation distinguished investigator grant NNF 0054563
6 · The paper itself

Abstract

MAIN

conclusionDevelopmental and organ-specific expression of genes in dhurrin biosynthesis, bio-activation, and recycling offers dynamic metabolic responses optimizing growth and defence responses in Sorghum. Plant defence models evaluate the costs and benefits of resource investments at different stages in the life cycle. Poor understanding of the molecular regulation of defence deployment and remobilization hampers accuracy of the predictions. Cyanogenic glucosides, such as dhurrin are phytoanticipins that release hydrogen cyanide upon bio-activation. In this study, RNA-seq was used to investigate the expression of genes involved in the biosynthesis, bio-activation and recycling of dhurrin in Sorghum bicolor. Genes involved in dhurrin biosynthesis were highly expressed in all young developing vegetative tissues (leaves, leaf sheath, roots, stems), tiller buds and imbibing seeds and showed gene specific peaks of expression in leaves during diel cycles. Genes involved in dhurrin bio-activation were expressed early in organ development with organ-specific expression patterns. Genes involved in recycling were expressed at similar levels in the different organ during development, although post-floral initiation when nutrients are remobilized for grain filling, expression of GSTL1 decreased > tenfold in leaves and NITB2 increased > tenfold in stems. Results are consistent with the establishment of a pre-emptive defence in young tissues and regulated recycling related to organ senescence and increased demand for nitrogen during grain filling. This detailed characterization of the transcriptional regulation of dhurrin biosynthesis, bioactivation and remobilization genes during organ and plant development will aid elucidation of gene regulatory networks and signalling pathways that modulate gene expression and dhurrin levels. In-depth knowledge of dhurrin metabolism could improve the yield, nitrogen use efficiency and stress resilience of Sorghum.

Indexed as

SorghumGene ExpressionGlycosidesNitrilesdhurrinGlycosidesNitrilesCyanogenic glucosidesDiel cycleHydrogen cyanideOntogenyPlant defenceRNA-seqSorghum bicolor

Identifiers

PMID34762174
PMCPMC8585852
OpenAlexW3212274098

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.