Evidence map›Paper›PMID 34757797›Full record

ArticleScience advances2021

Processive cleavage of substrate at individual proteolytic active sites of the Lon protease complex.

Shanshan Li, Kan-Yen Hsieh, Chiao-I Kuo, Shih-Chieh Su, Kai-Fa Huang, Kaiming Zhang, Chung-I Chang

Abstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
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  4. Article
  5. Article
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  8. Article
  9. TNFα increases the degradation of pyruvate dehydrogenase kinase 4 by the Lon protease to support proinflammatory genes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Article
  11. Article
  12. Review
  13. Unique Structural Fold of LonBA Protease fromInternational journal of molecular sciences · 2022
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shanshan LiMOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, Hefei National Laboratory for Physical Sciences at the Microscale and Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230027, China.ORCID 0000-0002-7041-5960
Kan-Yen HsiehInstitute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0001-9062-9803
Chiao-I KuoInstitute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.
Shih-Chieh SuInstitute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.
Kai-Fa HuangInstitute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0001-5235-7421
Kaiming ZhangMOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, Hefei National Laboratory for Physical Sciences at the Microscale and Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230027, China.ORCID 0000-0003-0414-4776
Chung-I ChangInstitute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0003-0989-1228

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Lon protease is the prototype of a family of proteolytic machines with adenosine triphosphatase modules built into a substrate degradation chamber. Lon is known to degrade protein substrates in a processive fashion, cutting a protein chain processively into small peptides before commencing cleavages of another protein chain. Here, we present structural and biochemical evidence demonstrating that processive substrate degradation occurs at each of the six proteolytic active sites of Lon, which forms a deep groove that partially encloses the substrate polypeptide chain by accommodating only the unprimed residues and permits processive cleavage in the C-to-N direction. We identify a universally conserved acidic residue at the exit side of the binding groove indispensable for the proteolytic activity. This noncatalytic residue likely promotes processive proteolysis by carboxyl-carboxylate interactions with cleaved intermediates. Together, these results uncover a previously unrecognized mechanism for processive substrate degradation by the Lon protease.

Identifiers

PMID34757797
PMCPMC8580320

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.