Evidence map›Paper›PMID 34757022›Full record

ArticleTheoretical population biology2022

A compendium of covariances and correlation coefficients of coalescent tree properties.

Egor Alimpiev, Noah A Rosenberg

Abstract read
In one paragraph

Article in Theoretical population biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Egor AlimpievDepartment of Biology, Stanford University, Stanford, CA 94305, United States of America. Electronic address: alimpiev@stanford.edu.
Noah A RosenbergDepartment of Biology, Stanford University, Stanford, CA 94305, United States of America.

Funding

Population genetics for large-scale sequencing studies of diverse populationsR01HG005855 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Noah Rosenberg, Paul A Scheet · 2010 to 2026
$5.8M
Scalable Coalescent Inference for Large Data SetsR01GM131404 · NIGMS · STANFORD UNIVERSITY · PI PALACIOS, JULIA · 2018 to 2021
$1.2M
NHGRI NIH HHS R01 HG005855NIGMS NIH HHS R01 GM131404
6 · The paper itself

Abstract

Gene genealogies are frequently studied by measuring properties such as their height (H), length (L), sum of external branches (E), sum of internal branches (I), and mean of their two basal branches (B), and the coalescence times that contribute to the other genealogical features (T). These tree properties and their relationships can provide insight into the effects of population-genetic processes on genealogies and genetic sequences. Here, under the coalescent model, we study the 15 correlations among pairs of features of genealogical trees: H

Indexed as

Genetics, PopulationModels, GeneticPedigreePhylogenyCoalescentExternal branchesGenealogiesInternal branchesTime to the most recent common ancestor

Identifiers

PMID34757022
PMCPMC9731325

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.