Evidence map›Paper›PMID 34756092›Full record

ArticleMicrobiology spectrum2021

Early Adoption of Longitudinal Surveillance for SARS-CoV-2 among Staff in Long-Term Care Facilities: Prevalence, Virologic and Sequence Analysis.

Emily N Gallichotte, Kendra M Quicke, Nicole R Sexton, Emily Fitzmeyer, Michael C Young, Ashley J Janich, Karen Dobos, Kristy L Pabilonia, Gregory Gahm, Elizabeth J Carlton and 2 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Modeling the Transmission Mitigation Impact of Testing for Infectious Diseases.medRxiv : the preprint server for health sciences · 2024
    Article
  5. Article
  6. Article
  7. Nurses' Experiences of Care in Portuguese Nursing Homes during the COVID-19 Pandemic: A Focus Group Study.International journal of environmental research and public health · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Observational
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Patient-blood management for COVID19 convalescent plasma therapy: relevance of affinity and donor-recipient differences in concentration of neutralizing antibodies.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2021
    Review
  20. Diagnostic performance of a SARS-CoV-2 rapid antigen test in a large, Norwegian cohort.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Emily N Gallichotte *Colorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.ORCID 0000-0002-8937-5583
Kendra M Quicke *Colorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.
Nicole R SextonColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.ORCID 0000-0002-5621-7618
Emily FitzmeyerColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.
Michael C YoungColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.
Ashley J JanichColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.
Karen DobosColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.ORCID 0000-0001-7115-8524
Kristy L PabiloniaColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.
Gregory GahmUniversity of Colorado Medical Center, Aurora, Colorado, USA.
Elizabeth J CarltonUniversity of Colorado Anschutz, Aurora, Colorado, USA.
Gregory D EbelColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.ORCID 0000-0002-4458-9959
Nicole EhrhartColorado State Universitygrid.47894.36, Ft. Collins, Colorado, USA.
Colorado State University · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Flavivirus cellular tropisms driving dissemination and transmission in mosquito vectorsF32AI150123 · NIAID · COLORADO STATE UNIVERSITY · PI QUICKE, KENDRA MARIE · 2020 to 2022
$204k
HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) F32AI150123-01NIAID NIH HHS F32 AI150123
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) emerged in 2019 and has become a major global pathogen in an astonishingly short period of time. The emergence of SARS-CoV-2 has been notable due to its impacts on residents in long-term care facilities (LTCFs). LTCF residents tend to possess several risk factors for severe outcomes of SARS-CoV-2 infection, including advanced age and the presence of comorbidities. Indeed, residents of LTCFs represent approximately 40% of SARS-CoV-2 deaths in the United States. Few studies have focused on the prevalence and transmission dynamics of SARS-CoV-2 among LTCF staff during the early months of the pandemic, prior to mandated surveillance testing. To assess the prevalence and incidence of SARS-CoV-2 among LTCF staff, characterize the extent of asymptomatic infections, and investigate the genomic epidemiology of the virus within these settings, we sampled staff for 8 to 11 weeks at six LTCFs with nasopharyngeal swabs from March through June of 2020. We determined the presence and levels of viral RNA and infectious virus and sequenced 54 nearly complete genomes. Our data revealed that over 50% of infections were asymptomatic/mildly symptomatic and that there was a strongly significant relationship between viral RNA (vRNA) and infectious virus, prolonged infections, and persistent vRNA (4+ weeks) in a subset of individuals, and declining incidence over time. Our data suggest that asymptomatic SARS-CoV-2-infected LTCF staff contributed to virus persistence and transmission within the workplace during the early pandemic period. Genetic epidemiology data generated from samples collected during this period support that SARS-CoV-2 was commonly spread between staff within an LTCF and that multiple-introduction events were less common.

Indexed as

HospitalsLong-Term CareAdolescentAdultAgedAsymptomatic InfectionsCohort StudiesCOVID-19COVID-19 TestingDiagnostic Tests, RoutineEpidemiological MonitoringFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedRNA, ViralcoronavirusCOVID-19epidemiologyinfectious diseaselong-term careSARS-CoV-2

Identifiers

PMID34756092
PMCPMC8579921
OpenAlexW3213545671

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.