ArticleNucleic acids research2022
BRAD V3.0: an upgraded Brassicaceae database.
Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers.
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Who cites it
134 citing papers in PubMed.
- Development and Usability Testing of a Mobile App-Based Clinical Decision Support System for Delirium: Randomized Crossover Trial.JMIR aging · 2024Trial
- First genome sequence of a European Alternaria brassicae isolate and genes involved in early development of alternaria leaf spot on Brassica juncea.Pest management science · 2026Article
- Machine learning-guided leaf margin classification and discovery that BcPHB promoter selection rewires a BcPHB-BcLMI1 module to shape leaf margins in Brassica campestris.Molecular horticulture · 2026Article
- Genetic variation in a plant-parasitic nematode is associated with host gene expression changes conserved across evolutionarily distant host plants.G3 (Bethesda, Md.) · 2026Article
- The HD-ZIP I transcription factor BcLMI1 regulates bolting time inHorticulture research · 2026Article
- Characterization of BrSTM16 from Brassica rapa and functional analysis of its role in regulating cold tolerance.BMC plant biology · 2026Article
- Genetic and Transcriptomic Analyses of the Purple Coloration Trait in the Inbred Line 7A01 ofPlants (Basel, Switzerland) · 2026Article
- Genome-Wide Analysis of the GRF-GIF Module inInternational journal of molecular sciences · 2026Article
- The NAC transcription factor BrrNAC082 positively mediates leaf senescence in Brassica rapa.The Plant journal : for cell and molecular biology · 2026Article
- Dynamic Transcriptomic Networks Underlying Early Bolting in Non-Heading Chinese Cabbage.Plants (Basel, Switzerland) · 2026Article
- Genome-Wide Identification ofPlants (Basel, Switzerland) · 2026Article
- Genome-wide identification of NRAMP gene family in Brassica U's triangle species and its response to Cadmium stress in B. napus.BMC plant biology · 2026Article
- Molecular dynamics and evolutionary conservation of FUL-SOC1 regulatory interactions in polyploid Brassica juncea.Functional & integrative genomics · 2026Article
- Structure, evolution, phylogeny, and analysis of domain-deficient genes in the IQD gene family of Brassica juncea.Scientific reports · 2026Article
- Genome-Wide Characterization of Nuclear Factor Y (NF-Y) Transcription Factors Gene Family in Cabbage (International journal of molecular sciences · 2026Article
- Genome-wide identification and analysis of the Delay Of Germination 1 (DOG1) gene family in Brassica napus and its potential role in Manganese (Mn) stress response.BMC plant biology · 2026Article
- Cloning and functional analysis of the lobed-leaf gene BjA10.LL in Brassica juncea L.Stress biology · 2026Article
- Genome-wide analysis of the CesA gene family in Brassica napus under abiotic stress and functional study of in root growth.BMC plant biology · 2026Article
- Analysis of the TIL gene family in Brassicaceae species and functional study ofFrontiers in plant science · 2026Article
- Beyond yellow: discovery and genetic dissection of an apricot petal color inFrontiers in plant science · 2026Article
74 more citing papers are in PubMed but not listed here.
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Brassicaceae Database (BRAD version 3.0, BRAD V3.0; http://brassicadb.cn) has evolved from the former Brassica Database (BRAD V2.0), and represents an important community portal hosting genome information for multiple Brassica and related Brassicaceae plant species. Since the last update in 2015, the complex genomes of numerous Brassicaceae species have been decoded, accompanied by many omics datasets. To provide an up-to-date service, we report here a major upgrade of the portal. The Model-View-ViewModel (MVVM) framework of BRAD has been re-engineered to enable easy and sustainable maintenance of the database. The collection of genomes has been increased to 26 species, along with optimization of the user interface. Features of the previous version have been retained, with additional new tools for exploring syntenic genes, gene expression and variation data. In the 'Syntenic Gene @ Subgenome' module, we added features to view the sequence alignment and phylogenetic relationships of syntenic genes. New modules include 'MicroSynteny' for viewing synteny of selected fragment pairs, and 'Polymorph' for retrieval of variation data. The updated BRAD provides a substantial expansion of genomic data and a comprehensive improvement of the service available to the Brassicaceae research community.
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