Evidence map›Paper›PMID 34753548›Full record

ArticleZhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics2021

Diversity of the T cell receptor β chain complementarity-determining region 3 in peripheral blood of neonates with sepsis: an analysis based on immune repertoire sequencing.

Xun-Bin Huang, Shu-Zhen Ye, Ji-Wei Wu, Qing-Song Fu, Bi-Hua Liu, Hui-Xian Qiu, Guo-Qiang Cheng

Open access · greenAbstract read
In one paragraph

Article in Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 77% of its field
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xun-Bin HuangDepartment of Neonatology, Longgang District Central Hospital of Shenzhen, Shenzhen, Guangdong 518116, China.
Shu-Zhen YeDepartment of Neonatology, Longgang District Central Hospital of Shenzhen, Shenzhen, Guangdong 518116, China.
Ji-Wei WuDepartment of Neonatology, Longgang District Central Hospital of Shenzhen, Shenzhen, Guangdong 518116, China.
Qing-Song FuDepartment of Neonatology, Longgang District Central Hospital of Shenzhen, Shenzhen, Guangdong 518116, China.
Bi-Hua LiuDepartment of Neonatology, Longgang District Central Hospital of Shenzhen, Shenzhen, Guangdong 518116, China.
Hui-Xian QiuDepartment of Neonatology, Longgang District Central Hospital of Shenzhen, Shenzhen, Guangdong 518116, China.
Guo-Qiang Cheng
Longgang Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo investigate the diversity of peripheral blood T cell receptor (TCR) β chain complementarity-determining region 3 (CDR3) based on immune repertoire sequencing in neonates with sepsis and the possible pathogenesis of neonatal sepsis.

methodsA total of 12 neonates with sepsis were enrolled as the case group, and 9 healthy full-term infants, matched for gestational age, birth weight, and age, were enrolled as the control group. Omega nucleic acid purification kit (SQ blood DNA Kit II) was used to extract DNA from peripheral blood samples, TCR β chain CDR3 was amplified by multiplex PCR, and then high-throughput sequencing was performed for the products to analyze the diversity of TCR β chain CDR3 and the difference in expression.

resultsThe length and type of TCR β chain CDR3 were similar between the case and control groups, and Gaussian distribution was observed in both groups. With D50 and Shannon-Wiener index as the evaluation indices for diversity, the case group had a significantly lower diversity of TCR β chain CDR3 than the control group (

conclusionsThere is a significant change in the diversity of TCR β chain CDR3 in the peripheral blood of neonates with sepsis, suggesting that it might be associated with the immune pathogenesis of neonatal sepsis.

Indexed as

Complementarity Determining RegionsNeonatal SepsisHigh-Throughput Nucleotide SequencingHumansMultiplex Polymerase Chain ReactionReceptors, Antigen, T-Cell, alpha-betaComplementarity Determining RegionsReceptors, Antigen, T-Cell, alpha-betaComplementarity-determining region 3DiversityHigh-throughput sequencingImmune repertoireNeonateSepsisT cell receptor

Identifiers

PMID34753548
PMCPMC8580019
OpenAlexW3213659466

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.