Evidence map›Paper›PMID 34752696›Full record

ArticleAnalytical chemistry2021

Quantifying Carbohydrate-Active Enzyme Activity with Glycoprotein Substrates Using Electrospray Ionization Mass Spectrometry and Center-of-Mass Monitoring.

Zhixiong Li, Pavel I Kitov, Elena N Kitova, Duong T Bui, Kelley W Moremen, Warren W Wakarchuk, Lara K Mahal, Matthew S Macauley, John S Klassen

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Zhixiong LiDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.
Pavel I KitovDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.
Elena N KitovaDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.
Duong T BuiDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.
Kelley W MoremenComplex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602, United States.
Warren W WakarchukDepartment of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada.ORCID 0000-0002-1539-1679
Lara K MahalDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.ORCID 0000-0003-4791-8524
Matthew S MacauleyDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.ORCID 0000-0003-4579-1048
John S KlassenDepartment of Chemistry, University of Alberta, Edmonton, Alberta T6G 2G2, Canada.ORCID 0000-0002-3389-7112
University of Alberta · CAUniversity of Georgia · US

Funding

TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI MOREMEN, KELLEY W. · 2012 to 2019
$14.5M
Recombinant Production of Glycosylation Enzymes for Biochem/Structural StudiesP01GM107012 · NIGMS · UNIVERSITY OF GEORGIA · PI PRESTEGARD, JAMES H. · 2013 to 2017
$7.5M
Origin of N-Glycan Site-Specific HeterogeneityR01GM130915 · NIGMS · UNIVERSITY OF GEORGIA · PI KANNAN, NATARAJAN, MOREMEN, KELLEY W. · 2019 to 2022
$3.4M
NIGMS NIH HHS P01 GM107012NIGMS NIH HHS P41 GM103390NIGMS NIH HHS R01 GM130915
6 · The paper itself

Abstract

Carbohydrate-active enzymes (CAZymes) play critical roles in diverse physiological and pathophysiological processes and are important for a wide range of biotechnology applications. Kinetic measurements offer insight into the activity and substrate specificity of CAZymes, information that is of fundamental interest and supports diverse applications. However, robust and versatile kinetic assays for monitoring the kinetics of intact glycoprotein and glycolipid substrates are lacking. Here, we introduce a simple but quantitative electrospray ionization mass spectrometry (ESI-MS) method for measuring the kinetics of CAZyme reactions involving glycoprotein substrates. The assay, referred to as center-of-mass (CoM) monitoring (CoMMon), relies on continuous (real-time) monitoring of the CoM of an ensemble of glycoprotein substrates and their corresponding CAZyme products. Notably, there is no requirement for calibration curves, internal standards, labeling, or mass spectrum deconvolution. To demonstrate the reliability of CoMMon, we applied the method to the neuraminidase-catalyzed cleavage of

Indexed as

CarbohydratesSpectrometry, Mass, Electrospray IonizationGlycoproteinsHumansKineticsReproducibility of ResultsCarbohydratesGlycoproteins

Identifiers

PMID34752696
PMCPMC8876726
OpenAlexW3213962368

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.