Evidence map›Paper›PMID 34750398›Full record

ArticleScientific reports2021

Genomic characterization between strains selected for death-feigning duration for avoiding attack of a beetle.

Keisuke Tanaka, Ken Sasaki, Kentarou Matsumura, Shunsuke Yajima, Takahisa Miyatake

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Keisuke TanakaNODAI Genome Research Center, Tokyo University of Agriculture, Tokyo, Japan.
Ken SasakiGraduate School of Agriculture, Tamagawa University, Tokyo, Japan.
Kentarou MatsumuraGraduate School of Agriculture, Kagawa University, Takamatsu, Japan.
Shunsuke YajimaNODAI Genome Research Center, Tokyo University of Agriculture, Tokyo, Japan.
Takahisa MiyatakeGraduate School of Environmental and Life Science, Okayama University, Okayama, Japan. miyatake@okayama-u.ac.jp.
Tokyo University of Agriculture · JPKagawa University · JPOkayama University of Science · JPTamagawa University · JP

Funding

Japan Society for the Promotion of Science 21H02568
6 · The paper itself

Abstract

Predator avoidance is an important behavior that affects the degree of adaptation of organisms. We compared the DNA variation of one of the predator-avoidance behaviors, the recently extensively studied "death-feigning behavior", between the long strain bred for feigning death for a long time and the short strain bred for feigning death for a short time. To clarify how the difference in DNA sequences between the long and short strains corresponds to the physiological characteristics of the death-feigning duration at the transcriptome level, we performed comprehensive and comparative analyses of gene variants in Tribolium castaneum strains using DNA-resequencing. The duration of death feigning involves many gene pathways, including caffeine metabolism, tyrosine metabolism, tryptophan metabolism, metabolism of xenobiotics by cytochrome P450, longevity regulating pathways, and circadian rhythm. Artificial selection based on the duration of death feigning results in the preservation of variants of genes in these pathways in the long strain. This study suggests that many metabolic pathways and related genes may be involved in the decision-making process of anti-predator animal behavior by forming a network in addition to the tyrosine metabolic system, including dopamine, revealed in previous studies.

Indexed as

Genome, InsectAdaptation, PhysiologicalAnimalsAvoidance LearningBehavior, AnimalCaffeineCircadian RhythmGene Regulatory NetworksImmobility Response, TonicLongevityMetabolic Networks and PathwaysProtein Interaction MapsSequence Analysis, DNATriboliumTryptophanTyrosineCaffeineTryptophanTyrosineXenobiotics

Identifiers

PMID34750398
PMCPMC8575940
OpenAlexW3214606700

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.