Evidence map›Paper›PMID 34749309›Full record

ArticleThe American journal of tropical medicine and hygiene2021

Detection of Pathogens of Acute Febrile Illness Using Polymerase Chain Reaction from Dried Blood Spots.

Brian Grundy, Ursula Panzner, Jie Liu, Hyon Jin Jeon, Justin Im, Vera von Kalckreuth, Frank Konings, Gi Deok Pak, Ligia Maria Cruz Espinoza, Abdramane Soura Bassiahi and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The American journal of tropical medicine and hygiene, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 7 countries.

Brian GrundyDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia.
Ursula PanznerInternational Vaccine Institute, Seoul, Republic of Korea.
Jie LiuDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia.
Hyon Jin JeonInternational Vaccine Institute, Seoul, Republic of Korea.
Justin ImInternational Vaccine Institute, Seoul, Republic of Korea.
Vera von KalckreuthInternational Vaccine Institute, Seoul, Republic of Korea.
Frank KoningsInternational Vaccine Institute, Seoul, Republic of Korea.
Gi Deok PakInternational Vaccine Institute, Seoul, Republic of Korea.
Ligia Maria Cruz EspinozaInternational Vaccine Institute, Seoul, Republic of Korea.
Abdramane Soura BassiahiInstitut Supeìrieur des Sciences de la Population, University of Ouagadougou, Burkina Faso.
Nagla GasmelseedFaculty of Medicine, University of Gezira, Wad Medani, Sudan.
Raphaël RakotozandrindrainyUniversity of Antananarivo, Antananarivo, Madagascar.
Suzanne StroupDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia.
Eric R HouptDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, Virginia.
Florian MarksInternational Vaccine Institute, Seoul, Republic of Korea.
International Vaccine Institute · KRUniversity of Virginia · USInstitut Superieur Des Sciences De La Population · BFUniversity of Antananarivo · MGUniversity of Basel · CHUniversity of Cambridge · GBUniversity of Gezira · SD

Funding

INFECTIOUS DISEASES TRAINING PROGRAMT32AI007046 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Alison K Criss, William A Petri · 1985 to 2026
$15.3M
Molecular Diagnostic Tools for Patient Oriented Field Studies in Infectious DiseasesK24AI102972 · NIAID · UNIVERSITY OF VIRGINIA · PI HOUPT, ERIC R · 2013 to 2022
$1.5M
NIAID NIH HHS K24 AI102972NIAID NIH HHS T32 AI007046
6 · The paper itself

Abstract

Quantitative polymerase chain reaction (qPCR) of dried blood spots (DBS) for pathogen detection is a potentially convenient method for infectious disease diagnosis. This study tested 115 DBS samples paired with whole blood specimens of children and adolescent from Burkina Faso, Sudan, and Madagascar by qPCR for a wide range of pathogens, including protozoans, helminths, fungi, bacteria, and viruses. Plasmodium spp. was consistently detected from DBS but yielded a mean cycle threshold (Ct) 5.7 ± 1.6 higher than that from whole blood samples. A DBS qPCR Ct cutoff of 27 yielded 94.1% sensitivity and 95.1% specificity against the whole blood qPCR cutoff of 21 that has been previously suggested for malaria diagnosis. For other pathogens investigated, DBS testing yielded a sensitivity of only 8.5% but a specificity of 98.6% compared with whole blood qPCR. In sum, direct PCR of DBS had reasonable performance for Plasmodium but requires further investigation for the other pathogens assessed in this study.

Indexed as

Acute DiseaseAdolescentBurkina FasoChildCommunicable DiseasesDried Blood Spot TestingFeverHumansMadagascarPolymerase Chain ReactionSudan

Identifiers

PMID34749309
PMCPMC8832910
OpenAlexW3213078039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.