Evidence map›Paper›PMID 34747533›Full record

ArticleProtein science : a publication of the Protein Society2022

DIALS as a toolkit.

Graeme Winter, James Beilsten-Edmands, Nicholas Devenish, Markus Gerstel, Richard J Gildea, David McDonagh, Elena Pascal, David G Waterman, Benjamin H Williams, Gwyndaf Evans

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed.

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  10. YdbL directly modulates YdbH-YnbE bridge formation to maintainbioRxiv : the preprint server for biology · 2026
    Article
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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Graeme WinterDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.ORCID 0000-0003-3165-0420
James Beilsten-EdmandsDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.
Nicholas DevenishDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.
Markus GerstelDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.
Richard J GildeaDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.
David McDonaghSTFC Rutherford Appleton Laboratory, Didcot, UK.
Elena PascalDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.
David G WatermanSTFC Rutherford Appleton Laboratory, Didcot, UK.
Benjamin H WilliamsDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.
Gwyndaf EvansDiamond Light Source Ltd, Harwell Science and Innovation Campus, Didcot, UK.ORCID 0000-0002-6079-2201

Funding

DIALS: New Computational Methods to Enable Challenging Crystallographic ExperimentsR01GM117126 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2016 to 2023
$6.1M
Realizing New Horizons in X-ray Crystallography Data ProcessingR01GM095887 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI SAUTER, NICHOLAS K · 2011 to 2014
$1.5M
NIGMS NIH HHS R01 GM095887NIGMS NIH HHS R01 GM117126Wellcome TrustWellcome Trust 202933/Z/16/ZWellcome Trust 218270/Z/19/Z
6 · The paper itself

Abstract

The DIALS software for the processing of X-ray diffraction data is presented, with an emphasis on how the suite may be used as a toolkit for data processing. The description starts with an overview of the history and intent of the toolkit, usage as an automated system, command-line use, and ultimately how new tools can be written using the API to perform bespoke analysis. Consideration is also made to the application of DIALS to techniques outside of macromolecular X-ray crystallography.

Indexed as

Electronic Data ProcessingSoftwareCrystallography, X-Raymethods developmentopen sourcesoftwareX-ray crystallography

Identifiers

PMID34747533
PMCPMC8740827

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.