Evidence map›Paper›PMID 34746695›Full record

ArticleiScience2021

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients.

NeuroLINCS Consortium, Jonathan Li, Ryan G Lim, Julia A Kaye, Victoria Dardov, Alyssa N Coyne, Jie Wu, Pamela Milani, Andrew Cheng, Terri G Thompson and 38 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors at 5 institutions in 1 country.

NeuroLINCS Consortium
Jonathan LiDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Ryan G LimUCI MIND, University of California, Irvine, CA 92697, USA.
Julia A KayeCenter for Systems and Therapeutics and the Taube/Koret Center for Neurodegenerative Disease, Gladstone Institutes, University of California, San Francisco, San Francisco, CA 94158, USA.
Victoria DardovThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Alyssa N CoyneBrain Science Institute, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Jie WuDepartment of Biological Chemistry, University of California, Irvine, CA 92697, USA.
Pamela MilaniDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Andrew ChengCellular and Molecular Medicine Program, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Terri G ThompsonUCI MIND, University of California, Irvine, CA 92697, USA.
Loren OrnelasThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Aaron FrankThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Miriam AdamDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Maria G BanuelosThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Malcolm CasaleUCI MIND, University of California, Irvine, CA 92697, USA.
Veerle CoxCellular and Molecular Medicine Program, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Renan Escalante-ChongDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
J Gavin DaigleBrain Science Institute, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Emilda GomezThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Lindsey HayesDepartment of Neurology and Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Ronald HolewenskiAdvanced Clinical Biosystems Research Institute, The Barbra Streisand Heart Center, The Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Susan LeiThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Alex LenailDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Leandro LimaCenter for Systems and Therapeutics and the Taube/Koret Center for Neurodegenerative Disease, Gladstone Institutes, University of California, San Francisco, San Francisco, CA 94158, USA.
Berhan MandefroThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Andrea MatlockAdvanced Clinical Biosystems Research Institute, The Barbra Streisand Heart Center, The Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Lindsay PantherThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Natasha Leanna Patel-MurrayDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Jacqueline PhamDepartment of Neurology and Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Divya RamamoorthyDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Karen SachsDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Brandon ShelleyThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Jennifer StocksdaleUCI MIND, University of California, Irvine, CA 92697, USA.
Hannah TrostThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Mark WilhelmBrain Science Institute, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Vidya VenkatramanAdvanced Clinical Biosystems Research Institute, The Barbra Streisand Heart Center, The Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Brook T WassieDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Stacia WymanSue and Bill Gross Stem Cell Center, University of California, Irvine, CA 92697, USA.
Stephanie YangBrain Science Institute, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
NYGC ALS Consortium
Jennifer E Van EykAdvanced Clinical Biosystems Research Institute, The Barbra Streisand Heart Center, The Smidt Heart Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Thomas E LloydDepartment of Neurology and Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Steven FinkbeinerCenter for Systems and Therapeutics and the Taube/Koret Center for Neurodegenerative Disease, Gladstone Institutes, University of California, San Francisco, San Francisco, CA 94158, USA.
Ernest FraenkelDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Jeffrey D RothsteinBrain Science Institute, Johns Hopkins University School of Medicine, Baltimore, MA 212056, USA.
Dhruv SareenThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Clive N SvendsenThe Board of Governors Regenerative Medicine Institute, Cedars-Sinai Medical Center, 8700 Beverly Boulevard, Los Angeles, CA 90048, USA.
Leslie M ThompsonUCI MIND, University of California, Irvine, CA 92697, USA.
Cedars-Sinai Medical Center · USMassachusetts Institute of Technology · USJohns Hopkins University · USUniversity of California, Irvine · USGladstone Institutes · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Neuron and Glial Cellular Signatures from Normal and Diseased iPS Cells-SupplementU54NS091046 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI FINKBEINER, STEVEN M, FRAENKEL, ERNEST · 2014 to 2020
$11.7M
Epigenetic Pathology and Therapy in Huntington's DiseaseR01NS089076 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FRAENKEL, ERNEST, HOUSMAN, DAVID · 2015 to 2024
$4.9M
Graduate Training in Computational and Systems BiologyT32GM087237 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BURGE, CHRISTOPHER B · 2009 to 2023
$4.6M
Nucleocytoplasmic transport and nuclear pore disruption in ALS/FTDR01NS094239 · NINDS · JOHNS HOPKINS UNIVERSITY · PI LLOYD, THOMAS E., ROTHSTEIN, JEFFREY D · 2016 to 2020
$3.4M
ALS/FTD mutant C9orf72-induced genetic and nuclear pathology in iPS cell modelsR01NS085207 · NINDS · JOHNS HOPKINS UNIVERSITY · PI ROTHSTEIN, JEFFREY D, SATTLER, RITA · 2013 to 2017
$1.8M
FG-nucleoporins and nuclear transport disruption in C9ORF72-ALS/FTDK08NS104273 · NINDS · JOHNS HOPKINS UNIVERSITY · PI HAYES, LINDSEY RENAE · 2017 to 2021
$999k
NCI NIH HHS P30 CA062203NIGMS NIH HHS T32 GM087237NINDS NIH HHS K08 NS104273NINDS NIH HHS R01 NS085207NINDS NIH HHS R01 NS089076NINDS NIH HHS R01 NS094239NINDS NIH HHS U54 NS091046
6 · The paper itself

Abstract

Neurodegenerative diseases are challenging for systems biology because of the lack of reliable animal models or patient samples at early disease stages. Induced pluripotent stem cells (iPSCs) could address these challenges. We investigated DNA, RNA, epigenetics, and proteins in iPSC-derived motor neurons from patients with ALS carrying hexanucleotide expansions in

Indexed as

Biological sciencesNeuroscienceOmicsSystems biologySystems neuroscience

Identifiers

PMID34746695
PMCPMC8554488
OpenAlexW3208168088

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.