Evidence map›Paper›PMID 34746098›Full record

ArticleFrontiers in chemistry2021

Site-Specific Protein Modifications by an Engineered Asparaginyl Endopeptidase from

Yu Chen, Dingpeng Zhang, Xiaohong Zhang, Zhen Wang, Chuan-Fa Liu, James P Tam

Open access · goldAbstract read
In one paragraph

Article in Frontiers in chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yu ChenSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Dingpeng ZhangSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Xiaohong ZhangSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Zhen WangSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Chuan-Fa LiuSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
James P TamSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Nanyang Technological University · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asparaginyl endopeptidases (AEPs) or legumains are Asn/Asp (Asx)-specific proteases that break peptide bonds, but also function as peptide asparaginyl ligases (PALs) that make peptide bonds. This ligase activity can be used for site-specific protein modifications in biochemical and biotechnological applications. Although AEPs are common, PALs are rare. We previously proposed ligase activity determinants (LADs) of these enzymes that could determine whether they catalyze formation or breakage of peptide bonds. LADs are key residues forming the S2 and S1' substrate-binding pockets flanking the S1 active site. Here, we build on the LAD hypothesis with the engineering of ligases from proteases by mutating the S2 and S1' pockets of VcAEP, an AEP from

Indexed as

asparaginyl endopeptidasescell surface labelingligase-activity determinantpeptide asparaginyl ligasesprotein engineeringViola canadensis

Identifiers

PMID34746098
PMCPMC8568951
OpenAlexW3207863382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.