Evidence map›Paper›PMID 34745183›Full record

ArticleFrontiers in plant science2021

Computational Analysis of Alternative Photosynthetic Electron Flows Linked With Oxidative Stress.

Nima P Saadat, Tim Nies, Marvin van Aalst, Brandon Hank, Büsra Demirtas, Oliver Ebenhöh, Anna Matuszyńska

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Reaction-Kinetic Modeling of Photorespiration Using Modelbase.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Nima P SaadatInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Tim NiesInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Marvin van AalstInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Brandon HankInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Büsra DemirtasInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Oliver EbenhöhInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Anna MatuszyńskaInstitute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.
Heinrich Heine University Düsseldorf · DECluster of Excellence on Plant Sciences · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During photosynthesis, organisms respond to their energy demand and ensure the supply of energy and redox equivalents that sustain metabolism. Hence, the photosynthetic apparatus can, and in fact should, be treated as an integrated supply-demand system. Any imbalance in the energy produced and consumed can lead to adverse reactions, such as the production of reactive oxygen species (ROS). Reaction centres of both photosystems are known sites of ROS production. Here, we investigate in particular the central role of Photosystem I (PSI) in this tightly regulated system. Using a computational approach we have expanded a previously published mechanistic model of C3 photosynthesis by including ROS producing and scavenging reactions around PSI. These include two water to water reactions mediated by Plastid terminal oxidase (PTOX) and Mehler and the ascorbate-glutathione (ASC-GSH) cycle, as a main non-enzymatic antioxidant. We have used this model to predict flux distributions through alternative electron pathways under various environmental stress conditions by systematically varying light intensity and enzymatic activity of key reactions. In particular, we studied the link between ROS formation and activation of pathways around PSI as potential scavenging mechanisms. This work shines light on the role of alternative electron pathways in photosynthetic acclimation and investigates the effect of environmental perturbations on PSI activity in the context of metabolic productivity.

Indexed as

cyclic electron flowelectron transport (photosynthetic)mathematical modelphotosynthesisreactive oxygen species

Identifiers

PMID34745183
PMCPMC8569387
OpenAlexW3211138330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.