Evidence map›Paper›PMID 34744636›Full record

ArticleFrontiers in neural circuits2021

Bitbow Enables Highly Efficient Neuronal Lineage Tracing and Morphology Reconstruction in Single

Ye Li, Logan A Walker, Yimeng Zhao, Erica M Edwards, Nigel S Michki, Hon Pong Jimmy Cheng, Marya Ghazzi, Tiffany Y Chen, Maggie Chen, Douglas H Roossien and 1 more

Abstract read
In one paragraph

Article in Frontiers in neural circuits, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  7. Hacking brain development to test models of sensory coding.bioRxiv : the preprint server for biology · 2023
    Article
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  9. Article
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ye LiDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Logan A WalkerBiophysics LS&A, University of Michigan, Ann Arbor, MI, United States.
Yimeng ZhaoDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Erica M EdwardsDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Nigel S MichkiBiophysics LS&A, University of Michigan, Ann Arbor, MI, United States.
Hon Pong Jimmy ChengDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Marya GhazziDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Tiffany Y ChenDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Maggie ChenDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Douglas H RoossienDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.
Dawen CaiDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, United States.

Funding

An Accessible Optical Toolbox for Saturated Nanoscale Analysis of Neural ArchitectureR01MH110932 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOYDEN, EDWARD S., CAI, DAWEN · 2016 to 2019
$2.8M
Visualizing epithelial network connectivity in thymus biology, aging, and regenerationR01AI130303 · NIAID · SCRIPPS FLORIDA · PI CAI, DAWEN, PETRIE, HOWARD T. · 2017 to 2019
$1.4M
NIAID NIH HHS R01 AI130303NIMH NIH HHS R01 MH110932
6 · The paper itself

Abstract

Identifying the cellular origins and mapping the dendritic and axonal arbors of neurons have been century old quests to understand the heterogeneity among these brain cells. Current Brainbow based transgenic animals take the advantage of multispectral labeling to differentiate neighboring cells or lineages, however, their applications are limited by the color capacity. To improve the analysis throughput, we designed Bitbow, a digital format of Brainbow which exponentially expands the color palette to provide tens of thousands of spectrally resolved unique labels. We generated transgenic Bitbow

Indexed as

DrosophilaNeuronsAnimalsAnimals, Genetically ModifiedAxonsBrainBitbowBrainbowDrosophila brainlineage tracingmorphological analysismulticolor transgenics

Identifiers

PMID34744636
PMCPMC8564373

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.