Evidence map›Paper›PMID 34743597›Full record

ArticlePhilosophical transactions. Series A, Mathematical, physical, and engineering sciences2021

Identification of approximate symmetries in biological development.

Punit Gandhi, Maria-Veronica Ciocanel, Karl Niklas, Adriana T Dawes

Open access · greenAbstract read
In one paragraph

Article in Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  5. Introduction to 'Recent progress and open frontiers in Turing's theory of morphogenesis'.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Punit GandhiDepartment of Mathematics and Applied Mathematics, Virginia Commonwealth University, Richmond, VA, USA.
Maria-Veronica CiocanelDepartment of Mathematics and Department of Biology, Duke University, Durham, NC, USA.
Karl NiklasSchool of Integrative Plant Biology, Cornell University, Ithaca, NY, USA.
Adriana T DawesDepartment of Mathematics and Department of Molecular Genetics, The Ohio State University, Columbus, OH, USA.ORCID 0000-0001-6055-2868
Cornell University · USDuke University · USThe Ohio State University · USVirginia Commonwealth University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Virtually all forms of life, from single-cell eukaryotes to complex, highly differentiated multicellular organisms, exhibit a property referred to as symmetry. However, precise measures of symmetry are often difficult to formulate and apply in a meaningful way to biological systems, where symmetries and asymmetries can be dynamic and transient, or be visually apparent but not reliably quantifiable using standard measures from mathematics and physics. Here, we present and illustrate a novel measure that draws on concepts from information theory to quantify the degree of symmetry, enabling the identification of approximate symmetries that may be present in a pattern or a biological image. We apply the measure to rotation, reflection and translation symmetries in patterns produced by a Turing model, as well as natural objects (algae, flowers and leaves). This method of symmetry quantification is unbiased and rigorous, and requires minimal manual processing compared to alternative measures. The proposed method is therefore a useful tool for comparison and identification of symmetries in biological systems, with potential future applications to symmetries that arise during development, as observed

Indexed as

Models, TheoreticalPhysicsMathematicsModels, BiologicalMorphogenesisPlantsapproximate symmetriesasymmetry measureinformation theory and entropymorphogenesis

Identifiers

PMID34743597
PMCPMC8580469
OpenAlexW3212522959

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.