Evidence map›Paper›PMID 34741351›Full record

ArticleYeast (Chichester, England)2022

Substrate, temperature, and geographical patterns among nearly 2000 natural yeast isolates.

William J Spurley, Kaitlin J Fisher, Quinn K Langdon, Kelly V Buh, Martin Jarzyna, Max A B Haase, Kayla Sylvester, Ryan V Moriarty, Daniel Rodriguez, Angela Sheddan and 5 more

Abstract read
In one paragraph

Article in Yeast (Chichester, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Diversity and extracellular enzymatic activity of culturable yeasts isolated from soil in a Brazilian Amazonian rainforest biome.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Colonization of vineyards by non-bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Saccharomycotina yeasts defy long-standing macroecological patterns.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. International journal of systematic and evolutionary microbiology · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Saccharomycotina yeasts defy longstanding macroecological patterns.bioRxiv : the preprint server for biology · 2023
    Article
  19. Evolution and molecular bases of reproductive isolation.Current opinion in genetics & development · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

William J SpurleyLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Kaitlin J FisherLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Quinn K LangdonLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Kelly V BuhLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Martin JarzynaLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Max A B HaaseLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Kayla SylvesterLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Ryan V MoriartyLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, Microbiology Doctoral Training Program, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Daniel RodriguezLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Angela SheddanLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Sarah WrightLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Lisa SorlieLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Amanda Beth HulfachorLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Dana A OpulenteLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Chris Todd HittingerLaboratory of Genetics, J. F. Crow Institute for the Study of Evolution, Wisconsin Energy Institute, DOE Great Lakes Bioenergy Research Center, Center for Genomic Science Innovation, University of Wisconsin-Madison, Madison, Wisconsin, USA.ORCID 0000-0001-5088-7461

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
NIGMS NIH HHS T32 GM007133
6 · The paper itself

Abstract

Yeasts have broad importance as industrially and clinically relevant microbes and as powerful models for fundamental research, but we are only beginning to understand the roles yeasts play in natural ecosystems. Yeast ecology is often more difficult to study compared to other, more abundant microbes, but growing collections of natural yeast isolates are beginning to shed light on fundamental ecological questions. Here, we used environmental sampling and isolation to assemble a dataset of 1962 isolates collected from throughout the contiguous United States of America (USA) and Alaska, which were then used to uncover geographic patterns, along with substrate and temperature associations among yeast taxa. We found some taxa, including the common yeasts Torulaspora delbrueckii and Saccharomyces paradoxus, to be repeatedly isolated from multiple sampled regions of the USA, and we classify these as broadly distributed cosmopolitan yeasts. A number of yeast taxon-substrate associations were identified, some of which were novel and some of which support previously reported associations. Further, we found a strong effect of isolation temperature on the phyla of yeasts recovered, as well as for many species. We speculate that substrate and isolation temperature associations reflect the ecological diversity of and niche partitioning by yeast taxa.

Indexed as

EcosystemTorulasporaTemperatureYeastsAscomycotaBasidiomycotaecologyfungiSaccharomycesyeasts

Identifiers

PMID34741351
PMCPMC8881392

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.