Evidence map›Paper›PMID 34738191›Full record

ArticleWorld journal of microbiology & biotechnology2021

Characterization and genomic analysis of an efficient dibutyl phthalate degrading bacterium Microbacterium sp. USTB-Y.

Zhenzhen Zhao, Chao Liu, Qianqian Xu, Shahbaz Ahmad, Haiyang Zhang, Yu Pang, Abudumukeyiti Aikemu, Yang Liu, Hai Yan

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Whole-genome analysis of3 Biotech · 2023
    Article
  3. Biodegradation of Uric Acid byMicroorganisms · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhenzhen ZhaoSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Chao LiuSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Qianqian XuSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Shahbaz AhmadSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Haiyang ZhangSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Yu PangSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Abudumukeyiti AikemuSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Yang LiuSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China.
Hai YanSchool of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, China. haiyan@ustb.edu.cn.ORCID http://orcid.org/0000-0002-2589-4798

Funding

National Natural Science Foundation of China 21677011
6 · The paper itself

Abstract

A promising bacterial strain for biodegrading dibutyl phthalate (DBP) was successfully isolated from activated sludge and characterized as a potential novel Microbacterium sp. USTB-Y based on 16S rRNA sequence analysis and whole genome average nucleotide identity (ANI). Initial DBP of 50 mg/L could be completely biodegraded by USTB-Y both in mineral salt medium and in DBP artificially contaminated soil within 12 h at the optimal culture conditions of pH 7.5 and 30 ℃, which indicates that USTB-Y has a strong ability in DBP biodegradation. Phthalic acid (PA) was identified as the end-product of DBP biodegraded by USTB-Y using GC/MS. The draft genome of USTB-Y was sequenced by Illumina NovaSeq and 29 and 188 genes encoding for putative esterase/carboxylesterase and hydrolase/alpha/beta hydrolase were annotated based on NR (non redundant protein sequence database) analysis, respectively. Gene3781 and gene3780 from strain USTB-Y showed 100% identity with dpeH and mpeH from Microbacterium sp. PAE-1. But no phthalate catabolic gene (pht) cluster was found in the genome of strain USTB-Y. The results in the present study are valuable for obtaining a more holistic understanding on diverse genetic mechanisms of PAEs biodegrading Microbacterium sp. strains.

Indexed as

Bacterial ProteinsBiodegradation, EnvironmentalDibutyl PhthalateGenome, BacterialGenomicsMicrobacteriumSewageBacterial ProteinsDibutyl PhthalateSewageDegrading characteristicsDegrading genesDibutyl phthalateMicrobacterium sp.Soil remediation

Identifiers

PMID34738191

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.