Evidence map›Paper›PMID 34737340›Full record

ArticleScientific reports2021

Development of a fully automatic deep learning system for L3 selection and body composition assessment on computed tomography.

Jiyeon Ha, Taeyong Park, Hong-Kyu Kim, Youngbin Shin, Yousun Ko, Dong Wook Kim, Yu Sub Sung, Jiwoo Lee, Su Jung Ham, Seungwoo Khang and 4 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Correlation Between Paravertebral Muscles Degeneration and Spinopelvic Parameters in Patients With Osteoporotic Vertebral Compression Fractures.Medical science monitor : international medical journal of experimental and clinical research · 2026
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  8. Deep-learning pipeline for automated skeletal muscle segmentation and sarcopenia detection.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2026
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  11. Review
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  15. Improved muscle and fat segmentation for body composition measures on quantitative CT.International journal of computer assisted radiology and surgery · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Jiyeon HaDepartment of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro, 43-gil, Songpa-gu, Seoul, 05505, Korea.
Taeyong ParkDepartment of Radiology and Research Institute of Radiology, University of Ulsan College of Medicine, Seoul, Korea.
Hong-Kyu KimHealth Screening and Promotion Center, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Youngbin ShinBiomedical Research Center, Asan Institute for Life Sciences, Asan Medical Center, Seoul, Korea.
Yousun KoBiomedical Research Center, Asan Institute for Life Sciences, Asan Medical Center, Seoul, Korea.
Dong Wook KimDepartment of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro, 43-gil, Songpa-gu, Seoul, 05505, Korea.
Yu Sub SungClinical Research Center, Asan Medical Center, Seoul, Korea.
Jiwoo LeeBiomedical Research Center, Asan Institute for Life Sciences, Asan Medical Center, Seoul, Korea.
Su Jung HamDepartment of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro, 43-gil, Songpa-gu, Seoul, 05505, Korea.
Seungwoo KhangSchool of Computer Science and Engineering, Soongsil University, Seoul, Korea.
Heeryeol JeongSchool of Computer Science and Engineering, Soongsil University, Seoul, Korea.
Kyoyeong KooSchool of Computer Science and Engineering, Soongsil University, Seoul, Korea.
Jeongjin LeeSchool of Computer Science and Engineering, Soongsil University, Seoul, Korea.
Kyung Won KimDepartment of Radiology and Research Institute of Radiology, Asan Medical Center, University of Ulsan College of Medicine, 88 Olympic-ro, 43-gil, Songpa-gu, Seoul, 05505, Korea. medimash@gmail.com.

Funding

Korea Health Industry Development Institute HI18C1216
6 · The paper itself

Abstract

As sarcopenia research has been gaining emphasis, the need for quantification of abdominal muscle on computed tomography (CT) is increasing. Thus, a fully automated system to select L3 slice and segment muscle in an end-to-end manner is demanded. We aimed to develop a deep learning model (DLM) to select the L3 slice with consideration of anatomic variations and to segment cross-sectional areas (CSAs) of abdominal muscle and fat. Our DLM, named L3SEG-net, was composed of a YOLOv3-based algorithm for selecting the L3 slice and a fully convolutional network (FCN)-based algorithm for segmentation. The YOLOv3-based algorithm was developed via supervised learning using a training dataset (n = 922), and the FCN-based algorithm was transferred from prior work. Our L3SEG-net was validated with internal (n = 496) and external validation (n = 586) datasets. Ground truth L3 level CT slice and anatomic variation were identified by a board-certified radiologist. L3 slice selection accuracy was evaluated by the distance difference between ground truths and DLM-derived results. Technical success for L3 slice selection was defined when the distance difference was < 10 mm. Overall segmentation accuracy was evaluated by CSA error and DSC value. The influence of anatomic variations on DLM performance was evaluated. In the internal and external validation datasets, the accuracy of automatic L3 slice selection was high, with mean distance differences of 3.7 ± 8.4 mm and 4.1 ± 8.3 mm, respectively, and with technical success rates of 93.1% and 92.3%, respectively. However, in the subgroup analysis of anatomic variations, the L3 slice selection accuracy decreased, with distance differences of 12.4 ± 15.4 mm and 12.1 ± 14.6 mm, respectively, and with technical success rates of 67.2% and 67.9%, respectively. The overall segmentation accuracy of abdominal muscle areas was excellent regardless of anatomic variation, with CSA errors of 1.38-3.10 cm

Indexed as

Abdominal MusclesAlgorithmsBody CompositionComputational BiologyDatabases, FactualDeep LearningHumansImage Processing, Computer-AssistedLumbar VertebraeMachine LearningMultidetector Computed TomographyNeural Networks, ComputerSarcopeniaTomography, X-Ray Computed

Identifiers

PMID34737340
PMCPMC8568923

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.