Evidence map›Paper›PMID 34736526›Full record

ArticleBiological research2021

Genome-wide identification and characteristic analysis of the downstream melatonin metabolism gene GhM2H in Gossypium hirsutum L.

Yuexin Zhang, Jing Wang, Xiugui Chen, Xuke Lu, Delong Wang, Junjuan Wang, Shuai Wang, Chao Chen, Lixue Guo, Waqar Afzal Malik and 6 more

Open access · goldAbstract read
In one paragraph

Article in Biological research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Identification of SNAT Family Genes SuggestsFrontiers in molecular biosciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Yuexin ZhangState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Jing WangState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Xiugui ChenState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Xuke LuState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Delong WangState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Junjuan WangState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Shuai WangState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Chao ChenState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Lixue GuoState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Waqar Afzal MalikState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Yapeng FanState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Cun RuiState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Ruifeng CuiState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Qinqin WangState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Yuqian LeiState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China.
Wuwei YeState Key Laboratory of Cotton Biology/Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Zhengzhou Research Base, School of Agricultural Sciences, Zhengzhou University Research Base, Zhengzhou University/Key Laboratory for Cotton Genetic Improvement, MOA, Anyang, Henan, China. yew158@163.com.ORCID http://orcid.org/0000-0002-0579-4909
Zhengzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMelatonin 2-hydroxylase (M2H) is the first enzyme in the catabolism pathway of melatonin, which catalyzes the production of 2-hydroxymelatonin (2-OHM) from melatonin. The content of 2-hydroxymelatonin in plants is much higher than that of melatonin. So M2H may be a key enzyme in the metabolic pathway of melatonin.

methodWe conducted a systematic analysis of the M2H gene family in Gossypium hirsutum based on the whole genome sequence by integrating the structural characteristics, phylogenetic relationships, expression profile, and biological stress of the members of the Gossypium hirsutum M2H gene family.

resultWe identified 265 M2H genes in the whole genome of Gossypium hirsutum, which were divided into 7 clades (clades I-VII) according to phylogenetic analysis. Most M2H members in each group had similar motif composition and gene structure characteristics. More than half of GhM2H members contain ABA-responsive elements and MeJA-responsive elements. Under different stress conditions, the expression levels of the gene changed, indicating that GhM2H members were involved in the regulation of abiotic stress. Some genes in the GhM2H family were involved in regulating melatonin levels in cotton under salt stress, and some genes were regulated by exogenous melatonin.

conclusionThis study is helpful to explore the function of GhM2H, the downstream metabolism gene of melatonin in cotton, and lay the foundation for better exploring the molecular mechanism of melatonin improving cotton's response to abiotic stress.

Indexed as

GossypiumMelatoninGene Expression Regulation, PlantMultigene FamilyPhylogenyPlant ProteinsMelatoninPlant Proteins2-hydroxymelatoninAbiotic stressCottonGene familyM2HMelatonin

Identifiers

PMID34736526
PMCPMC8567562
OpenAlexW3211104623

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.