Evidence map›Paper›PMID 34734216›Full record

ArticleMedical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention2021

Adapting Off-the-Shelf Source Segmenter for Target Medical Image Segmentation.

Xiaofeng Liu, Fangxu Xing, Chao Yang, Georges El Fakhri, Jonghye Woo

Abstract read
In one paragraph

Article in Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Source-free unsupervised domain adaptation: A survey.Neural networks : the official journal of the International Neural Network Society · 2024
    Pooled it
  2. Article
  3. Article
  4. Treatment-wise Glioblastoma Survival Inference with Multi-parametric Preoperative MRI.Proceedings of SPIE--the International Society for Optical Engineering · 2024
    Article
  5. Article
  6. Incremental Learning for Heterogeneous Structure Segmentation in Brain Tumor MRI.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
  7. Article
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  14. Brain MR Atlas Construction Using Symmetric Deep Neural Inpainting.IEEE journal of biomedical and health informatics · 2022
    Article
  15. SELF-SEMANTIC CONTOUR ADAPTATION FOR CROSS MODALITY BRAIN TUMOR SEGMENTATION.Proceedings. IEEE International Symposium on Biomedical Imaging · 2022
    Article
  16. Article
  17. Generative Self-training for Cross-domain Unsupervised Tagged-to-Cine MRI Synthesis.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2021
    Article
  18. Unsupervised Domain Adaptation for Segmentation with Black-box Source Model.Proceedings of SPIE--the International Society for Optical Engineering
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xiaofeng LiuGordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114.
Fangxu XingGordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114.
Chao YangFacebook Artificial Intelligence, Boston, MA, 02142.
Georges El FakhriGordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114.
Jonghye WooGordon Center for Medical Imaging, Department of Radiology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114.

Funding

Unified Joint Statistical Reconstruction of PET & MRP41EB022544 · NIBIB · YALE UNIVERSITY · PI Georges El Fakhri · 2017 to 2026
$14.8M
Using Atlas-driven Imaging for Determining Variations in Velopharyngeal Function Among Children with Cleft Palate and Hypernasal SpeechR01DE027989 · NIDCR · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI PERRY, JAMIE L, SUTTON, BRADLEY P · 2019 to 2022
$2.7M
A holistic approach to identifying functional units of tongue motion during speechR01DC018511 · NIDCD · MASSACHUSETTS GENERAL HOSPITAL · PI WOO, JONGHYE · 2020 to 2024
$2.6M
NIBIB NIH HHS P41 EB022544NIDCD NIH HHS R01 DC018511NIDCR NIH HHS R01 DE027989
6 · The paper itself

Abstract

Unsupervised domain adaptation (UDA) aims to transfer knowledge learned from a labeled source domain to an unlabeled and unseen target domain, which is usually trained on data from both domains. Access to the source domain data at the adaptation stage, however, is often limited, due to data storage or privacy issues. To alleviate this, in this work, we target source free UDA for segmentation, and propose to adapt an "off-the-shelf" segmentation model pre-trained in the source domain to the target domain, with an adaptive batch-wise normalization statistics adaptation framework. Specifically, the domain-specific low-order batch statistics, i.e., mean and variance, are gradually adapted with an exponential momentum decay scheme, while the consistency of domain shareable high-order batch statistics, i.e., scaling and shifting parameters, is explicitly enforced by our optimization objective. The transferability of each channel is adaptively measured first from which to balance the contribution of each channel. Moreover, the proposed source free UDA framework is orthogonal to unsupervised learning methods, e.g., self-entropy minimization, which can thus be simply added on top of our framework. Extensive experiments on the BraTS 2018 database show that our source free UDA framework outperformed existing source-relaxed UDA methods for the cross-subtype UDA segmentation task and yielded comparable results for the cross-modality UDA segmentation task, compared with a supervised UDA methods with the source data.

Identifiers

PMID34734216
PMCPMC8562716

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.