Evidence map›Paper›PMID 34732777›Full record

ArticleScientific reports2021

Distribution and genome structures of temperate phages in acetic acid bacteria.

Koki Omata, Naruhiro Hibi, Shigeru Nakano, Shuji Komoto, Kazuki Sato, Kei Nunokawa, Shoichi Amano, Kenji Ueda, Hideaki Takano

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Genome Sequence ofmicroPublication biology · 2025
    Article
  3. Viruses · 2024
    Article
  4. Article
  5. Article
  6. Comprehensive deciphering prophages in genusFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Koki OmataLife Science Research Center, College of Bioresource Sciences, Nihon University, Kanagawa, Japan.
Naruhiro HibiMizkan Holdings Co., Ltd, Aichi, Japan.
Shigeru NakanoMizkan Holdings Co., Ltd, Aichi, Japan.
Shuji KomotoMizkan Holdings Co., Ltd, Aichi, Japan.
Kazuki SatoLife Science Research Center, College of Bioresource Sciences, Nihon University, Kanagawa, Japan.
Kei NunokawaLife Science Research Center, College of Bioresource Sciences, Nihon University, Kanagawa, Japan.
Shoichi AmanoLife Science Research Center, College of Bioresource Sciences, Nihon University, Kanagawa, Japan.
Kenji UedaLife Science Research Center, College of Bioresource Sciences, Nihon University, Kanagawa, Japan.
Hideaki TakanoLife Science Research Center, College of Bioresource Sciences, Nihon University, Kanagawa, Japan. takano.hideaki@nihon-u.ac.jp.
Nihon University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acetic acid bacteria (AAB) are industrial microorganisms used for vinegar fermentation. Herein, we investigated the distribution and genome structures of mitomycin C-inducible temperate phages in AAB. Transmission electron microscopy analysis revealed phage-like particles in 15 out of a total 177 acetic acid bacterial strains, all of which showed morphology similar to myoviridae-type phage. The complete genome sequences of the six phages derived from three strains each of Acetobacter and Komagataeibacter strains were determined, harboring a genome size ranging from 34,100 to 53,798 bp. A phage AP1 from A. pasteurianus NBRC 109446 was predicted as an active phage based on the genomic information, and actually had the ability to infect its phiAP1-cured strain. The attachment sites for phiAP1 were located in the 3'-end region of the tRNA

Indexed as

Acetic AcidAcetobacterAcetobacteraceaeAmpicillinBacteriaBacteriophagesCluster AnalysisComputational BiologyFermentationGenetic EngineeringGenome, BacterialGenomicsMicroscopy, Electron, TransmissionMitomycinMyoviridaeOpen Reading FramesAcetic AcidAmpicillinMitomycin

Identifiers

PMID34732777
PMCPMC8566455
OpenAlexW3209803344

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.