Evidence map›Paper›PMID 34732126›Full record

ArticleBMC immunology2021

Natural immunogenic properties of bioinformatically predicted linear B-cell epitopes of dengue envelope and pre-membrane proteins.

Mahesha N Nadugala, Chandima Jeewandara, Ramesh S Jadi, Gathsaurie N Malavige, Aravinda M de Silva, Prasad H Premaratne, Charitha L Goonasekara

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Mahesha N NadugalaFaculty of Medicine, General Sir John Kotelawala Defence University, Ratmalana, Sri Lanka.
Chandima JeewandaraAllergy Immunology and Cell Biology Unit, University of Sri Jayewardanapura, Gangodawila, Sri Lanka.
Ramesh S JadiDepartment of Microbiology and Immunology, University of North Carolina, Chapel Hill, NC, 27599, USA.
Gathsaurie N MalavigeCentre for Dengue Research, University of Sri Jayawardanapura, Gangodawila, Sri Lanka.
Aravinda M de SilvaDepartment of Microbiology and Immunology, University of North Carolina, Chapel Hill, NC, 27599, USA.
Prasad H PremaratneFaculty of Medicine, General Sir John Kotelawala Defence University, Ratmalana, Sri Lanka.
Charitha L GoonasekaraFaculty of Medicine, General Sir John Kotelawala Defence University, Ratmalana, Sri Lanka. charithalg@kdu.ac.lk.
General Sir John Kotelawala Defence University · LKUniversity of North Carolina at Chapel Hill · USUniversity of Sri Jayewardenepura · LK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe natural antibody responses to B-cell epitopes from dengue structural proteins were assessed using immune sera from people having well-defined past dengue infections with one of the four serotypes.

methodBased on an immune-computational analysis previously conducted, nineteen epitopes from the envelope (E) and eight epitopes from pre-membrane (prM), which were more than 50% conserved across all the four DENV serotypes, were selected. Peptides to represent these B-cell epitopes were obtained from commercially available arrays, and were subjected to enzyme linked immunosorbent assay with sera obtained from dengue seropositive healthy volunteers (DENV1 n = 12: DENV2 n = 12: DENV3 n = 12 and DENV4 n = 12), and 10 dengue seronegative healthy volunteers from Sri Lanka. The cut-off value for the positive antibody response was set by taking the mean response of a peptide to the negative sera plus three standard deviations. The peptides (N = 7) showing the broad immune responses were used to generate antibodies in three mice (Balb/c) batches. The mice antisera were then subjected to microneutralization assays against all the four DENV serotypes. An EC

resultsFive of the E-peptide and two prM peptides were recognised by most individuls exposed to infections with each of the four serotypes, showing a serotype cross-reactive broad antibody response. The mice immune sera against the peptides representing the five E protein epitopes neutralized all the four DENV serotypes. Two of these five epitopes are from the Domain II, whereas one of them includes the whole bc-loop region.

conclusionThe antibody responses of highly conserved epitopes across the serotypes, were broadly responsive with sera of all four DENV serotypes collected from individuals infected with only one DENV serotype. Weakly conserved epitopes showed rather specific antibody responses dominated by one or few serotypes.

Indexed as

AnimalsAntibodies, NeutralizingComputational BiologyConserved SequenceCross ReactionsDengueDengue VirusEpitope MappingEpitopes, B-LymphocyteHealthy VolunteersHumansImmunizationMiceMice, Inbred BALB CViral Envelope ProteinsViral ProteinsAntibodies, NeutralizingEpitopes, B-LymphocyteE protein, Dengue virus type 3E protein TH Sman, Dengue virusglycoprotein E, dengue virus type 4prM protein, Dengue virus type 3Viral Envelope ProteinsViral ProteinsDengueE proteinMicroneutralizationNatural infectionsprM protein

Identifiers

PMID34732126
PMCPMC8567598
OpenAlexW3208736585

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.