ArticleBMC plant biology2021
Genome-wide investigation of the GRAS transcription factor family in foxtail millet (Setaria italica L.).
Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed, 40 citations in OpenAlex.
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- Genome-wide identification of GRAS gene family in Camellia oleifera and expression analysis under abiotic stress.BMC plant biology · 2026Article
- Genome-wide identification of the GATA transcription factor family in ten Cucurbitaceae species and expression analysis of ClGATA genes in watermelon stress responses.BMC genomics · 2026Article
- Identification and expression profiling of the GRAS gene family reveals candidate genes for enhancing abiotic stress tolerance in lentil.BMC plant biology · 2026Article
- Tissue-Specific Expression Analysis and Functional Validation ofPlants (Basel, Switzerland) · 2025Article
- Genome-wide characterization of GRAS gene family and their expression profiles under diverse biotic and abiotic stresses in Amorphophallus konjac.BMC genomics · 2025Article
- Genome-Wide Identification ofBiology · 2025Article
- Identification of two new GRAS transcription factors and expression analysis of these genes inFrontiers in plant science · 2025Article
- Genome-wide identification and expression analysis of the glutathione transferase gene family and its response to abiotic stress in rye (Secale cereale).BMC genomics · 2024Article
- Review
- Genome-wide identification and expression analysis of the SPL gene family and its response to abiotic stress in barley (Hordeum vulgare L.).BMC genomics · 2024Article
- GRAS gene family in rye (Secale cereale L.): genome-wide identification, phylogeny, evolutionary expansion and expression analyses.BMC plant biology · 2024Article
- Identification and expression profiling ofFrontiers in plant science · 2024Article
- Genome-wide identification and characterization of3 Biotech · 2023Article
- Genome-wide identification and expression analysis of the GRAS gene family under abiotic stresses in wheat (Triticum aestivum L.).Scientific reports · 2023Article
- Transcriptome-Wide Identification of the GRAS Transcription Factor Family inInternational journal of molecular sciences · 2023Article
- Genome-Wide Identification, Expression and Stress Analysis of the GRAS Gene Family inPlants (Basel, Switzerland) · 2023Article
- Functional Study ofInternational journal of molecular sciences · 2023Article
- Genome-Wide Analysis and Expression of theGenes · 2023Article
- Genome-wide identification and characterization of abiotic stress responsive GRAS family genes in oat (PeerJ · 2023Article
Corrections and comments
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Authors and funding
12 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundGRAS transcription factors perform indispensable functions in various biological processes, such as plant growth, fruit development, and biotic and abiotic stress responses. The development of whole-genome sequencing has allowed the GRAS gene family to be identified and characterized in many species. However, thorough in-depth identification or systematic analysis of GRAS family genes in foxtail millet has not been conducted.
resultsIn this study, 57 GRAS genes of foxtail millet (SiGRASs) were identified and renamed according to the chromosomal distribution of the SiGRAS genes. Based on the number of conserved domains and gene structure, the SiGRAS genes were divided into 13 subfamilies via phylogenetic tree analysis. The GRAS genes were unevenly distributed on nine chromosomes, and members of the same subfamily had similar gene structures and motif compositions. Genetic structure analysis showed that most SiGRAS genes lacked introns. Some SiGRAS genes were derived from gene duplication events, and segmental duplications may have contributed more to GRAS gene family expansion than tandem duplications. Quantitative polymerase chain reaction showed significant differences in the expression of SiGRAS genes in different tissues and stages of fruits development, which indicated the complexity of the physiological functions of SiGRAS. In addition, exogenous paclobutrazol treatment significantly altered the transcription levels of DELLA subfamily members, downregulated the gibberellin content, and decreased the plant height of foxtail millet, while it increased the fruit weight. In addition, SiGRAS13 and SiGRAS25 may have the potential for genetic improvement and functional gene research in foxtail millet.
conclusionsCollectively, this study will be helpful for further analysing the biological function of SiGRAS. Our results may contribute to improving the genetic breeding of foxtail millet.
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