Evidence map›Paper›PMID 34731338›Full record

ArticleJournal of digital imaging2021

Reducing False-Positive Biopsies using Deep Neural Networks that Utilize both Local and Global Image Context of Screening Mammograms.

Nan Wu, Zhe Huang, Yiqiu Shen, Jungkyu Park, Jason Phang, Taro Makino, S Gene Kim, Kyunghyun Cho, Laura Heacock, Linda Moy and 1 more

Abstract read
In one paragraph

Article in Journal of digital imaging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Nan WuCenter for Data Science, New York University, New York City, USA. nw1045@nyu.edu.ORCID http://orcid.org/0000-0002-4953-5933
Zhe HuangCenter for Data Science, New York University, New York City, USA.
Yiqiu ShenCenter for Data Science, New York University, New York City, USA.
Jungkyu ParkCenter for Data Science, New York University, New York City, USA.
Jason PhangCenter for Data Science, New York University, New York City, USA.
Taro MakinoCenter for Data Science, New York University, New York City, USA.
S Gene KimDepartment of Radiology, New York University School of Medicine, New York City, USA.
Kyunghyun ChoCenter for Data Science, New York University, New York City, USA.
Laura HeacockDepartment of Radiology, New York University School of Medicine, New York City, USA.
Linda MoyDepartment of Radiology, New York University School of Medicine, New York City, USA.
Krzysztof J GerasCenter for Data Science, New York University, New York City, USA.

Funding

TR&D 4: Revealing Microstructure: Biophysical modeling and validation for discovery and clinical careP41EB017183 · NIBIB · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Christopher M Collins · 2014 to 2026
$19.3M
Reducing recall rates of screening mammography with deep convolutional neural networkR21CA225175 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MOY, LINDA · 2018 to 2019
$395k
NCI NIH HHS R21 CA225175NIBIB NIH HHS P41 EB017183NIH HHS P41EB017183NIH HHS R21CA225175
6 · The paper itself

Abstract

Breast cancer is the most common cancer in women, and hundreds of thousands of unnecessary biopsies are done around the world at a tremendous cost. It is crucial to reduce the rate of biopsies that turn out to be benign tissue. In this study, we build deep neural networks (DNNs) to classify biopsied lesions as being either malignant or benign, with the goal of using these networks as second readers serving radiologists to further reduce the number of false-positive findings. We enhance the performance of DNNs that are trained to learn from small image patches by integrating global context provided in the form of saliency maps learned from the entire image into their reasoning, similar to how radiologists consider global context when evaluating areas of interest. Our experiments are conducted on a dataset of 229,426 screening mammography examinations from 141,473 patients. We achieve an AUC of 0.8 on a test set consisting of 464 benign and 136 malignant lesions.

Indexed as

Breast NeoplasmsMammographyBiopsyEarly Detection of CancerFemaleHumansNeural Networks, ComputerBreast cancerDeep neural networksGlobal contextLocal patternsScreening mammography

Identifiers

PMID34731338
PMCPMC8669066

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.